Salvelinus namaycush (lake trout): 120044705
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Entry
120044705 CDS
T07522
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120044705
03041 Spliceosome [BR:
snh03041
]
120044705
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120044705
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120044705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
FUBP_C
Motif
Other DBs
NCBI-GeneID:
120044705
NCBI-ProteinID:
XP_038845314
UniProt:
A0A8U0QNV4
LinkDB
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Position
Sna1:45546251..45625367
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AA seq
550 aa
AA seq
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MMMAELVQGQASVSQSEMKADGFAHALHRARQMAEKMRIEQISHLNSSPPIVDPSMYGYG
DQKRSVEDGVGNQLGAMVHQRAVLTEDFKVPDRMVGFIIGRGGEQITRIQLESGCKIQIA
SESGGMMDRACSLNGTPESIEQAKRMLGQIVDRCRNSSGFHSEAEDNSSVHEMLIPASKV
GLVIGRGGDTIKQLQERIGVKMMMIQDGPMPTGADKPLRITGDPYKVQQARELVIEIIRD
KYQGDFRSGRNDFASRLGGSTLDVAVPRFAVGIVIGRSGEMIKKIQEDSGVRIQFKPDDG
ISPERIAQVMGQPDRCQHAVQLINELTQTAQERDGFGSSGGPRGRGRGRGDWGMGSPGGL
QEITYTILADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPPNTDPNVRVFSIRGTPQQM
EVACQLIDDKIGGSGIVSNGSFGLSPYTQSPATHQNCGSGAQTLMTGGWGTGYQTWQPQG
QQDHSHNGSQAGQMDYSTAWEQYYKKLGQTSQQQSSLPEYSAAMAEYYRQQGAYLWPGAQ
ATQGPDLQEH
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggagttggtgcagggacaggcctccgtttctcagtccgaaatgaaagct
gacggcttcgcccacgctttacatcgggcccgacagatggcagaaaaaatgaggattgag
cagatttcacacctaaacagttccccacctattgtagacccctccatgtatggctacgga
gaccagaagcgatcggtggaagacggcgtaggtaaccagctgggagccatggtacatcaa
agggctgttttgacagaagactttaaagtgcctgatagaatggttggattcatcataggc
agaggaggtgaacaaattacgagaatccagctggagtccgggtgcaagattcaaattgcc
tctgagagtggcggtatgatggacagagcctgctccctcaatggaaccccagagagcatt
gagcaggccaaaagaatgcttgggcagatagtggaccgctgtcgaaacagctctgggttc
cacagcgaggctgaggacaacagctcagtccacgagatgctcatcccagccagcaaagtg
ggcctagtcatcgggaggggaggggacaccatcaagcaactgcaggagagaataggagtg
aagatgatgatgatccaggatggccccatgcccaccggggcggacaaacccctgagaatc
actggggatccctacaaggtccagcaagcgcgggaattggtgatagagatcatccgcgac
aaataccagggagacttccgcagtggccgaaacgactttgcgtcaagattgggtggaagt
actttggatgtggctgtacccaggtttgcagtggggattgtcatcggcaggagtggcgag
atgatcaagaagatccaggaagattccggagtgaggatccaattcaaaccagatgatggc
atcagcccagagcgcatcgcccaagtgatgggacaaccagacaggtgtcagcacgctgtc
caactcatcaacgagctcacccaaacagcacaggaacgtgatggctttggaagctctgga
ggaccaagaggaaggggaagaggtcgcggggactggggcatgggctcaccagggggactg
caggagatcacctacacgatacttgcagacaagtgtggtctggtgatcggcaaaggcgga
gataccatcaagagtatcaaccagcagtctggagcccacgtggagctgcagaggaacccc
cctcccaacaccgaccccaatgttcgcgtcttctccatcagaggcaccccgcaacagatg
gaggtagcatgccagctcattgacgacaagatcggaggctcaggaatagtgagcaatggt
agttttgggttgagcccttacactcaaagccctgcaactcatcaaaattgtggcagtgga
gcccagactttaatgacagggggatgggggactggttatcaaacatggcagcctcaaggc
cagcaagaccacagtcacaatggatcccaggcaggccagatggactactctacagcttgg
gagcagtattataaaaagctaggtcagacatctcagcagcagagctcactcccagaatac
agtgcagctatggcagaatattacaggcagcagggagcgtacctctggccgggtgcacag
gcaacccagggcccagatcttcaggagcattag
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