Salvelinus namaycush (lake trout): 120044819
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Entry
120044819 CDS
T07522
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome homolog
KO
K28154
splicing regulator ARVCF
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120044819
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120044819
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
V-ATPase_H_N
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
120044819
NCBI-ProteinID:
XP_038845417
UniProt:
A0A8U0QL32
LinkDB
All DBs
Position
Sna3:15325802..15370778
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AA seq
972 aa
AA seq
DB search
MPAEVKGEQIPEGPSSLGAMILEPKEPPVEHPLPADDDLDTPTSNTSVVTSTNGSSTTET
QYSEAEDPKAVELGSDQADTLGTPDTPAPQLPPAPQPPPVPQIPLVSDDPSLKPSPLTNG
QHSSESLTTPITTTVTTNTLPPPYNNTISEPQTEKPEGQNSAYTLPDPPFPGLGGGMCAG
YGSLSRGGVHQSSLHTYWPSRNYQPQPGGHYTLPLPRDIYGQVGLTNQTGREGPGDDTLG
GIHQLRPITTMELLREPSRTRGGYEEALMSQVDGDPISFFQAMSRAQMLQFPHKRSSMVS
LDSIRKDPRWRDPNLSEVITMLSHPMDPVKSNAAAYLQHLCYENDRIKQDVRQLKGVPVL
VGLLDHPKAEVHRKACGALRNISYGKDHHNKVAIKNCDGIPALVRLLRKSSNMEVTELVT
GTLWNLSSHEPLKMMVINHGLQTLTDEVIIPHSGWRRDLTEHSRPQETEWTTVFKNTSGC
LRNVSSDGAEARQRLRECEGLVDALLHALQSAVANKETDNKSVENCVCILRNLSYHVHKE
VPGAERFQEPVANQVPRSGSGGKKKNEADCFGGKKPKEEWFSQSWRNGPGDKKYGTLDLP
KRTQPTKGLELLYQPEVVRLYLSLLTRSQNHNTLEAAAGALQNLAAGHWAWSSYIRATVR
KEKGLPVLVELLRSDGDKVVRAVAIALRNLAIDRRNKDLIGSYAMRDLVSNLPSGQQRPA
KNLEGDTVVAILNTIHEIISDSPENARGLIQGHGIQKLVAINKTSQSVRETKAASHVLQT
VWAYKDLRNSLYKGGWNKSHFKSTTSGMPKKTKSGKSAYDDITLPLMEKNQDGYSTVEQC
DRVGDGLLQSIPERKHFIRAGRPAVGLVERKPPPLDSWTLVHPPPLASALHLKTPVHPPP
LASALHLKTLVHPPPLASALHLKTLVHPPPLTHHLFIWTLASPHGLKNYDSSGKDSVGLA
KGSTLSPPTTPS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaggtgaaaggggagcagatcccagaggggccctcctctctgggggccatg
atcctggagcccaaggagcccccggtggagcatccattgcctgcagacgatgacctggac
acacccacctccaacacctccgtggtcacctccaccaatggcagttccactacagagaca
caatactcagaggcagaggaccccaaggctgttgaactggggagtgaccaggcagacact
ctgggcactccagacacccccgccccccagcttcccccagcaccgcagcctcccccggtt
ccccagatccccttggtttcagacgacccatctctgaagcccagtcctctaaccaacggc
caacactcctctgagtccctcacaacccctatcacaaccactgttaccaccaacactctc
cctcctccctacaacaacaccatcagtgagccccagacagagaagcctgaagggcagaac
agcgcctacaccctccctgaccctccctttcctggcctggggggtggcatgtgtgctggg
tatggcagcctgtctcgaggtggtgtccaccagagctccctccacacctactggccctcc
aggaactaccagccccagcctgggggtcactacaccctgcccctccccagggacatctac
ggccaggtgggcctgaccaaccaaaccgggagggaaggaccaggggacgacaccctgggt
ggaatccaccagctcagacccatcactaccatggagctcctgagggaaccttccagaacc
agaggtggatacgaggaggctctcatgtcccaggtggatggggatcccatctccttcttc
caggccatgtccagggcccagatgctacagttcccccacaagcgcagtagcatggtcagc
ctggacagcatccgtaaggacccccgctggagggaccccaacctgagtgaggtcatcacc
atgctcagccaccccatggacccggtcaagtccaacgccgccgcctacttgcagcacctg
tgctacgagaacgaccgcataaagcaggacgtcaggcagctgaagggggttccagtactg
gtgggcctcctggaccaccctaaagccgaggtccaccgcaaggcctgtggagccctgagg
aacatctcctacgggaaagaccaccacaacaaggtggccatcaagaactgtgacggcatc
ccggccctggtcagactgctgaggaagtccagtaacatggaggtcacagagttggtcaca
ggaaccctgtggaatctgtcctcccatgagcctctgaagatgatggtcatcaatcatggg
ctccagacgctgactgatgaggtcatcatcccccactctggctggaggagagacctcact
gagcactcaagaccccaggagacagagtggacaaccgtgttcaagaacacctcagggtgt
ctcaggaatgtgagctcagatggggcagaggctcgccagaggctgagggagtgtgagggg
ctggtggacgctctcctccatgccctacagtcagcggttgccaacaaggagacagacaat
aagtcagtagagaactgtgtctgcatcctgagaaacctctcctaccacgtccacaaagag
gtgccaggagcggagcgatttcaggaacccgtggccaatcaggtgccacggtcaggatca
ggagggaagaagaagaatgaggcagactgttttggagggaaaaagcccaaggaggagtgg
ttcagtcaaagctggagaaatggaccaggtgacaaaaaatatggtacactggatttaccc
aaacgcacacaaccaacaaaaggtctggagctgctgtaccagccggaggtggtgaggttg
tacctgtctctcctcactcgcagtcaaaaccacaacaccctggaggcagcagccggagct
ctgcagaaccttgctgcaggacactgggcttggtccagttacatccgggccacagttagg
aaggagaaaggtctgcctgtcctggtggagctactgcgttcagatggtgataaagtggtc
cgggctgtagctattgctctacgcaacctggccatagatcgacggaacaaagacctcata
ggaagctatgccatgagggacctggtcagtaacctgcccagtggtcagcagcgaccagcc
aagaacctggaaggggacacagtggtggccattctgaacactatccatgagatcatctca
gatagccctgagaatgcccgtggtctcatacagggccacggcatccagaaactggtggcc
atcaacaagacaagccaatctgtgcgggagaccaaagcagcatctcatgtcctgcagaca
gtgtgggcctacaaggacctgagaaatagcctctacaagggaggctggaacaagagccac
tttaagtcaacaactagtggaatgcccaaaaaaactaagagcggaaagtcagcctatgat
gacatcacactccctctgatggagaaaaaccaagatggatactccaccgtggagcagtgt
gacagagtgggtgatggattactccagagtatcccagagaggaagcacttcatccgggct
ggaaggcctgcagtgggtctggtggaacgcaaacctccacccctcgattcctggaccctg
gtacatcctccacccctggcctctgcccttcacctgaagaccccggtacatcctccaccc
ctggcctctgcccttcacctgaagaccctggtacatcctccacccctggcctctgccctt
cacctgaagaccctggtacatcctccaccactgactcatcatcttttcatttggaccctg
gccagcccccatggactgaagaactacgactcctccggcaaagactcagtaggcctagcc
aagggttcaacccttagtcccccaaccacacccagctga
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