Salvelinus namaycush (lake trout): 120044899
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Entry
120044899 CDS
T07522
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh00514
Other types of O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120044899
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120044899
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120044899
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120044899
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
O-linked Gal type
120044899
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120044899
NCBI-ProteinID:
XP_038845551
UniProt:
A0A8U0UB85
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All DBs
Position
Sna3:complement(8239045..8255014)
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AA seq
590 aa
AA seq
DB search
MFLWVLVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNAPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQTDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagatcagaatgttacttttcg
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccgtactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactacagct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggccc
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaacttaaacaggctgctctcaacttcgccaagacacgctgggct
gactacatactgtatgctgacacagacaacatcctgaccaacccagagacgctgaacctt
ctgatagcagagaacaagtctgttgtggcccccatgctggactctcagggagcctactcc
aactactggtgcgggatcactccccaaggttactaccggcgtacagctgagtatttcccc
accagacagcgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggcatgaagaagctggccttccacccccctcaccaggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgccccagccaagcctcaccac
accatagaggacgacagcatcagcttcagccatctcatcctggaggccaccatcgatggc
ccccccatggccccctccaaatacgtgagccttttccccaaacagagagacctcatgggc
ttcgatgaggtgtacctgatcaacctgcgtcgtcgtcaggaccgtagagacaggatgctg
tattctctcaatgagctggagatagatgtcaaggtggtggacgccatagatggaggagct
ctgaacagcagtgatataaagatcctaggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgacaaaaggagaggtgggatgcttcctgagtcattactacatc
tggaaggagatggtagaccagcagatggacaaggcgctgatctttgaggatgacgtgcgg
ttccaggccaacttcaagcggcgcgtgctgcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctacgcc
atctctctccagggcgcccagaaactgctcaacgctgaacccctctccaagatgctgccc
gtcgatgaattcttacccatcatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagctcaa
tacgccggggaccccaagtgggtgagcgacacagagacctccacgctgtgggacgacgac
aacgtgcgaacagactggaggggctcccacaaaacgctgaagggggctccccaaaccgac
atgctgcagacgtcatataaagatgagctgtag
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