Salvelinus namaycush (lake trout): 120044909
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Entry
120044909 CDS
T07522
Name
(RefSeq) rab GTPase-activating protein 1-like isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120044909
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120044909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
ERM_helical
UPF0242
Motif
Other DBs
NCBI-GeneID:
120044909
NCBI-ProteinID:
XP_038845568
UniProt:
A0A8U0UAF2
LinkDB
All DBs
Position
Sna3:complement(9495450..9657197)
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AA seq
1100 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRLGDDTPGSSINNGSDDEKTGLKVISEEGVS
FKIVGNGSEQQLQKELEDVLMDPSVADQILSGGGGGGGWGDQVGGGDHVSQPTTAVPLQS
VPQPCPDPLSDPLNTPPKVEMVLPVQSAQGAQESELNERSYRGDESSSECSPSTPIPDED
SVVFNKLTYLGCASVNAPRSEVEALCMMTVLRGQCQLPLDVTLSVPGVSEGTVRLLDPQT
STEIASYPIYKIMFCVRGHDGTPETDCFAFTESHYNAEIFHIHVFRCEIQEAVSRILYSF
ATAFRRSAKKTLLSGLAPPLTPDSDVFTFTVSLEIKEDDGKGTFSAVAKDKDKNSFKLRP
GMDKKLFIYVQQTSNKELSIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITG
SWNPNTPQFQAVNEETPKDTFIYMTTAVDLVITEVEEPVRFLLETRVRVCSPNERLFWPF
SKRSYTETFYLKLRQMERKRNKDTLYEVLSLESELERERKKTTASPNILQSASQGSMVLS
PPEDDEEEENDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGVP
EALRGEVWQLLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQ
DSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNF
EDLHCKFFQLERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLL
LCEGISVIFNVALALLKTSREDLLATDFEGALKFFRVPVPKRYRSEENAKKLMELACSMK
ISQKKLKKYEKEYHSMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKI
ALRKDLDNAEEKVDALNKELLMTKQKLVDSEDEKRRLEEESAQLKEMCRRELGKSESEIK
KNGSIIGEYKQICSQLSERLEKQQIANKGEVEKIRLKVEGCEKCSILFNKEGRLKAVKKM
EGSEEETDEEKEGLKNQLREMELELAQTKLQLVEAECKIQDLEHTLGLALNEVQAAKKTW
FNRTLTSIKTVTGAQGKETT
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcctcggtggggaaaattagcgtgtcgtccgactcagtgtccaccctg
aacagtgaggactttgtgctggtgtcgcggctgggggacgacaccccaggctcctccatt
aataacggtagcgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagc
tttaagattgtggggaacggcagtgagcagcagttgcagaaggagttggaggatgttctg
atggacccctctgtagctgaccagattctgagcggtgggggtggcggtggtggctgggga
gaccaggtgggagggggggaccatgtgtcccagcccaccacagcagtaccactccagtcc
gtgccccaaccgtgccctgaccccctcagcgaccccctcaacaccccgccaaaagttgag
atggttctgcccgtccaatccgcacaaggtgcacaggagagcgagctaaatgaacgatcg
taccgcggggatgagtcgtcatcggagtgcagccccagtacacccatcccagacgaggac
agtgtggtcttcaataagctgacctacctgggctgtgcctcggtcaatgccccccgcagt
gaggtggaagcgctctgcatgatgaccgtcctcagagggcagtgccagctacccctggac
gtcaccctatctgtgcccggcgtctcagagggcaccgtcaggttgctggacccccagaca
agcacagagatagccagttaccccatctacaagatcatgttctgtgtgcgtggtcatgac
ggcacacctgagactgactgctttgccttcacagagagccactacaacgcagagatcttc
catatacatgtcttccgctgtgagatccaagaggcggtcagcaggatactgtacagcttc
gccacggcctttaggcggtccgccaagaagacgctcctctcgggcttggctccgcccctg
acgccagacagcgacgtcttcaccttcaccgtcagtctagagatcaaggaggatgatggg
aaagggacctttagcgctgtggcgaaagacaaagacaagaacagcttcaagctgcgtccg
ggaatggacaagaagctcttcatctacgtacagcagacgtccaataaggagctgtctata
gagaggtgcttcggcctactgctgagcccagggaagaacgtgaagaacagtgacatgcac
ctgctagacctggagtcaatggggaagtcctccgatggaaagtcctacatcatcacaggg
agctggaatcccaacacaccccagttccaggctgtcaacgaggagacacccaaagatacg
tttatctacatgacgacggcggtggacctggtgatcactgaggtggaggagccggttcgt
ttcctgctggagaccagggtcagagtctgctcccccaacgagaggctcttctggccattc
agcaaacgcagctacacagagactttctacctgaaactcagacagatggagcgtaagagg
aacaaggacaccctgtacgaggtgctgagcctggagagtgagttagagagggagaggaag
aagacgacagccagccccaacatcctgcagtctgcctcccaaggatccatggtgctatcg
ccccccgaggatgatgaggaggaagagaatgacgagccgttgctgagtggctcaggagac
gtgtcaaaagagtgtgctgagaagatcctggagacctggggagacctgctgtccaaatgg
catctgaacctgtctgtgcgtcccaagcagctcccggctttggtgcgtagcggggtccca
gaggccctcaggggagaggtgtggcagctcctggccggttgccataacaacgaccaccaa
gtggaggagtaccgcaccctcatcactaaggagtctccccaggacagtgccatcaccaga
gacattaacaggactttcccagctcacgactacttcaaggacactggaggagacgggcaa
gactcactctacaagatctgcaaggcctactcagtgtatgatgaggagattggttactgc
cagggacagtctttcctggctgctgtgctgctgctgcacatgcctgaggaacaggccttc
agtgttctggtcaagatcatgtttgactacggactcagggacctcttcaagcagaacttt
gaggatctacactgcaagttcttccagctggagagactcatgcaggagtacatcccagac
ctgtataaccacttcctgaatgtgggtcttgaggctcatatgtacgcctctcagtggttc
cttacactcttcacagccaagttccccctctacatggtgttccacatcatagacctgcta
ctctgtgagggcatcagtgtgatcttcaacgtggctctggctctcctgaagacctcaagg
gaagacctgctggcaacagactttgagggggcgctcaagttcttccgggtcccggttccc
aaacgctaccgctcagaggagaacgctaagaaactgatggagctggcctgcagcatgaag
atcagccagaagaagctgaagaagtatgagaaggaatatcacagcatgagagagcagcag
gagcagcaggaggctcccattgagagatatgagagggagaaccgtcgtctccaggaggct
aacatgcgtctggagcaggagaatgatgacctggcccatgaactggtcagcagcaagatc
gctctgcgcaaagacctggacaacgctgaggagaaagtagacgctctgaacaaggagctg
ttgatgaccaaacagaagctggtggattcagaggacgagaagagacgactagaggaggag
tctgcacagctgaaagagatgtgcaggcgggagctgggtaaatcagagtctgagataaag
aagaatggttccatcataggagagtacaaacagatctgctctcagctcagtgagcgtctg
gagaaacagcagatcgccaacaagggagaggtggagaaaatccggctgaaggtggagggc
tgtgagaagtgctctatcctcttcaacaaggagggtcgtctaaaggcagtgaagaagatg
gagggcagcgaggaagagacggatgaggagaaggagggtctgaagaaccagctcagagag
atggagctggaactggcccagaccaaactacaactggtggaggcagagtgcaagatacag
gacttggagcacaccctgggtctggccctgaacgaggtccaggcagccaagaagacctgg
ttcaacagaaccttaacctccatcaagaccgtgacgggagcacaggggaaggagactacc
taa
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