Salvelinus namaycush (lake trout): 120044951
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Entry
120044951 CDS
T07522
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K-like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120044951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120044951
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
hnRNP proteins
120044951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
120044951
NCBI-ProteinID:
XP_038845630
UniProt:
A0A8U0UAM5
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All DBs
Position
Sna3:complement(12028614..12041150)
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AA seq
432 aa
AA seq
DB search
METEIEQQEEETTFSNTDTNGKRPAEDMEEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIETIGEILLKIIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGTKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPDRVV
DCIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMMFEERGRRPMGGFSVRGRGGFE
RMPPGRGGRPMPPSRRDYDDLSPRRGPPPPLPTRGRGGSRARNLPLPLPPPPRGGDRFSH
QSYHGNMDDRPNSDRRGRPGDRYDSMSGGYGDNTSSWEPFQSGGRGSYSDIGGPVITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYLLQ
NRHVLAPFPRLR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaatcgagcagcaggaagaagagaccactttcagcaacactgacactaac
ggtaaacgccctgccgaggatatggaggaggagcaggccttcaagcgctctcgcaacact
gatgagatggtggagctgcgggtactgctgcagagcaaaaatgctggagctgttatcgga
aagggtggcaagaatataaaagccttacgcacagactacaatgccagtgtatctgtccct
gacagcagtggcccagagcggatcctgagtgtgagtgcagatattgagactatcggagag
attctgctgaagattatccctactctggaagagtaccagcattataacgggattgatttt
gactgcgagctgcgtttgctgatccatcagagtttggctggaggcatcattggggtgaag
ggtaccaagataaaggagttaagagagaacacccagactaccatcaagctattccaggag
tgctgtcctcactccactgaccgagtggttctggttggaggaaagccagaccgtgtcgtc
gattgcatcaaagttatcctggagttggtatctgaggctcctatcaaagggcgcgcccag
ccttacgaccccaacttctacgacgagacatacgactacggcggcttcaccatgatgttc
gaggagcggggccggcggcctatgggggggttctccgtacggggccggggtggctttgag
cgcatgccccccggccgcggcggccgacccatgcccccctccagacgggactatgacgac
ttgagccctcgccggggaccgccccctcccctgccaaccagagggcgtggagggagccga
gctcgaaacctgcccctccccctaccaccacccccaagaggaggggaccggttctctcat
cagagctatcacggcaacatggacgacagaccaaacagcgacaggagaggaagaccagga
gaccgctacgacagcatgagtggtggatacggtgacaacacttcctcgtgggagcccttt
cagtctggtggccgagggtcatacagtgacatcgggggtcccgtcattacgacacaagtt
accatccccaaggatctggccggctccatcattgggaagggcggacagcggattaagcag
atccgtcatgagtcgggagcgtccatcaagatcgacgagccactagagggctccgaggac
cgcatcatcaccatcaatggaacacaggaccagatccagaacgcccagtatctactgcag
aacaggcacgtgctagcaccctttcctcgtctccgctga
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