Salvelinus namaycush (lake trout): 120044952
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Entry
120044952 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120044952
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120044952
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120044952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
DUF6244
TFIIA
Zn_SUZ12
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120044952
NCBI-ProteinID:
XP_038845638
UniProt:
A0A8U0QKX6
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Position
Sna3:complement(12093212..12103822)
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AA seq
391 aa
AA seq
DB search
MFQRSNTSSVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTSEHAMQCILT
RVDFDLYYGGEAFSVEQPQSFSCPYCGKMGYTETSLQEHVTSDHAETSTEVICPICAALP
GGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHHGRGLGGPRARRTNMHFTSSS
TGGLSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQL
ERQQAQAARQQLETARNATRRSNPGGNISATIPPPVANSAGVAESNLMASHSSQFLLTRL
NEPKMSEAERQALEGERADRSLFVQELLLSTLMREESSSSDEDERRDFASFGAMGCVDIM
PLDVALENLNLRESGYNSSSRSSKEPPPPPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaagaagtaatacttctagtgtgagctgtgacgcgtgtttaaaagggaacttc
agagggcgccggtacaagtgtttaatttgctacgactacgacctgtgcgcatcgtgctac
gagagcggagctacaacaacgagacacacgtcggagcacgccatgcagtgtatattaacc
agggtagactttgacctgtattacggcggcgaggcgttctcagtagagcagccccagagc
ttttcctgtccttactgtggtaaaatgggctacacagagacatccctacaggagcatgtc
acctcagaccatgcagagacttccacagaggtgatctgtccaatatgtgctgcgttgccg
ggcggggaccccaatcacgtgactgacgactttgctgctcatctcacacttgaacacaga
gcacctagagacttagatgagtccagtggtgtccggcacgtgcgtcggatgttccaccac
ggtcgtgggctgggcggtcctagggcacgcaggaccaacatgcactttactagcagctcc
actggggggctctcttcctcacagagttcctcttactcccccagtaacagggaagccatg
gaccctatagcagagctattgtctcagctgtcgggcgtgcggcgctcggcgggaggccag
ctcaactcgtcggggccatctgcgtctcagctgcagcagctacagatgcagctgcagctg
gagcgccagcaggcccaggcggcccgccagcagctggagacggccaggaacgccacacga
cgctctaaccccggcggcaacatcagtgccaccatcccacctcccgtcgccaactcggcc
ggcgtggccgagagcaatctcatggcctcccacagctcccagttcttgctcacacgtttg
aatgagcccaagatgtcggaggcggagcggcaggcgctggagggtgagcgcgctgaccgc
agcctgtttgtccaggagctgctgttgagcacgctgatgcgcgaggagagctcctcttcg
gacgaggacgagcggcgagactttgccagctttggggccatgggctgcgtggatatcatg
cctttagacgtggccctggagaacctcaacctcagggagagcggttacaacagcagctct
aggagctctaaggaacctccaccgcctcctctttga
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