Salvelinus namaycush (lake trout): 120044970
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Entry
120044970 CDS
T07522
Name
(RefSeq) BRCA1-associated protein-like isoform X1
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120044970
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120044970
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120044970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_11
RRM_1
CENPH
zf-C3HC4_3
zf-ANAPC11
Crescentin
Sec10_N
V_ATPase_I
Tropomyosin
FUSC
CENP-F_leu_zip
ATG16
Phage_GP20
YabA
DUF1664
CSTF_C
Motif
Other DBs
NCBI-GeneID:
120044970
NCBI-ProteinID:
XP_038845672
UniProt:
A0A8U0QLL4
LinkDB
All DBs
Position
Sna3:13093111..13103339
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AA seq
599 aa
AA seq
DB search
MSVSLVVIRLELADQSLSPQDFQYTAVEDMSEEDLQEKALSSARLSLSGKTELERAAVLH
QHIGSRTMGDMVIETFASNPDKEEGEQTGAEGEEGGGAQPLEDQPDGRGPTEGPTEVSAE
GTEVALDSPSKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMLCILTVP
TTMTSHDLMKFVAPFYDVMEHMKIIRDSTSNQYMVLIKFSSQADADSFYTACNGRTFNSI
EDAVCQLVYVERAEVIKSEQGASLPVMELTELPKCTVCLERMDESVNGVLTTLCNHSFHS
LCLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYISRHAYKHF
EETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKMVQYGCEGETCQEEKIDALQLEYS
HLLTSQLESQRIYWENKIVHLEKDTAEEINNMKAKFKETIDRCDNLERRLGELAKDKQGM
DKKCGQLSTRVTKLGQELKEEQEMNRCLRANQVQLQAQLAEDEHKARETGERKDGVIAEL
QEQLRDVMFYLETQQQIQSLPPETRTEIQEGHINIGAAVTPAPGPSTAIGRRGRSKKGK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtcactggtagttatccgtctggagctcgcagaccagtctctttctccacag
gatttccaatacaccgctgttgaggatatgtcagaggaggatttgcaggagaaagcactg
agctcagccaggctctctctgagtgggaagacagagttggagagagcagccgtcttacat
cagcacatcggcagcagaaccatgggagacatggtcatcgagaccttcgcatccaaccct
gataaagaagagggtgagcagactggggcagagggagaggagggtggaggagcccaaccc
ctagaggatcaaccagacgggaggggtcctactgagggccctacagaggtcagtgccgag
ggcacagaggtggctctagactcgccctccaagcagcttccagaccagatctccttcttc
agtggaaacccctcagtggagatagtccacggcatcatgcacctctacaagaccaacaag
atgacatcactgacggaggacgtgcgtcgcagtgccatgctgtgtatcctgaccgtcccc
accaccatgacaagccacgacctcatgaagtttgtggcaccattttatgatgtcatggag
cacatgaagatcatacgagactccacctctaaccagtacatggtgctgatcaagtttagt
agccaggctgatgcagatagtttctacacagcgtgtaatggccgtacgttcaactccata
gaggatgcagtctgccagctggtctatgtggagagagctgaggtcatcaagtctgagcag
ggcgccagtcttccagtgatggagctgacagagcttcctaagtgtaccgtgtgtctggag
aggatggatgagtcagtgaatggggttctcactacactctgtaaccacagcttccacagc
ctgtgtctgcaacgctgggaggatgcctcgtgtcctgtgtgtcggtattgtcagacccca
gagcctgtagaggagaacaagtgctttgaatgtggagttcaggagaacctttggatctgt
ctgatctgtggtcatatcggctgtggtcgctacatcagtcgtcatgcctacaaacacttt
gaggagacgcaacacacgtacgccatgcagctcactaaccaccgtgtctgggactatgct
ggagataactatgttcacaggctggtggccagtaagactgatgggaagatggttcagtac
gggtgtgaaggagaaacctgtcaagaggagaagatagacgctctgcaactagagtactct
cacctgctaacgagtcagctggagtcccagcgcatttactgggagaataagattgttcac
ctggagaaggacaccgcagaggagatcaacaacatgaaggccaagtttaaggagaccata
gatcgatgtgataacctggagcgtcggctgggagagctggccaaggacaaacagggcatg
gacaagaagtgtggtcagttgtcgacccgtgtgacgaagcttggtcaggagctgaaagag
gaacaggaaatgaaccgctgtctgagagccaatcaggttcagctacaggcccagttggct
gaagatgagcacaaggctagagagactggcgagcgtaaggacggggtgatagcagagctc
caggagcagctgagagatgtcatgttttacctggagactcagcagcagatacaaagtctg
cctccagagaccaggactgagatacaggaaggacacatcaacataggcgcagcagtcact
cctgccccaggaccctccaccgccataggccgcagggggcggtccaaaaaggggaagtag
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integrated database retrieval system
