Salvelinus namaycush (lake trout): 120044991
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Entry
120044991 CDS
T07522
Name
(RefSeq) heparanase-like isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00531
Glycosaminoglycan degradation
snh01100
Metabolic pathways
Module
snh_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120044991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120044991
Enzymes [BR:
snh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
120044991
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Enzymes
120044991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Cu2_monooxygen
Motif
Other DBs
NCBI-GeneID:
120044991
NCBI-ProteinID:
XP_038845716
UniProt:
A0A8U0UBE3
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Position
3:complement(14543622..14556203)
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AA seq
544 aa
AA seq
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MSGILILALVISILSHGYYVGASVRSARDEVNFESVNLNVDLSRVLKRVNERFLSVAIDA
SLVAEEKFMYLLASPKLRTLAKALSPAFLRFGGTRQDFMTFNPAFLHSNEYHKNSVFDAD
DLCERLELPPILEERLKQEWALHEVLLQKEDLQRKYRSVKFTEYAVDLLYSFTNCSGLDL
IFGLNELLRTTGNSWDSSNARTLIQYCESKQYSMAWELGNEPNSYEKKAGIRVNGYQLGQ
DFIQLRRILRESKLYHDTGLYGPDISQPRDHRRDLLEGFLESGAEAIDACTWHHYYVNGR
HTSLKDFLDPEVLNTLALKTHEVIKTVDLASPGKKVWLGETSSAYGGGAKGLSDTFVAGF
MWLDKLGLGAKLGLDVVIRQVLIGSGTYHLVDDNLDPLPDYWLSVLYKRLVGPEVLSIEA
FSILGKTKRVRVYLHCTNKKSTSYKSGAVTLFALNLSKSPASIAVPAMVSNSTVEAFVLQ
SEQPGEEGLYSKSVKLNGEVLKMVDDRTLPSLQGTPLAAGEHLRLPGYSFAFYLLSEAQA
LACR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcatattaatcttggcattagtgatatctattctatctcatggatattatgtc
ggagcaagtgtcaggtctgcgagggatgaggtgaattttgagtctgtaaatctgaatgta
gacctctctcgagtactcaagagagtgaacgaacgttttttgtctgtggccatagatgcg
agtctcgtcgctgaagagaagttcatgtaccttttagcgtctccaaagctgaggacattg
gctaaagctttatccccagcatttctaagatttggagggacaagacaagatttcatgacc
ttcaaccctgcatttttacattcaaatgagtatcacaaaaactctgtttttgatgcagat
gatctctgtgaaaggctggagctgcccccaatactggaggagaggctgaagcaggaatgg
gctctacatgaagtacttctccagaaagaggacttgcagaggaagtaccggagtgtaaag
ttcacagagtatgcagtggatctactgtactctttcacaaactgctctggattagacctc
atctttgggctcaatgagctgctcaggaccactggcaactcctgggacagcagcaatgcc
aggaccctcatacagtactgtgaatccaaacagtacagcatggcctgggagctgggcaat
gagcccaacagttatgagaagaaggcagggatccgggtgaacggataccagctgggccaa
gacttcattcaactccgcaggattctgcgggaatccaaactttaccatgacactggactc
tatggaccagacattagccaaccccgagaccaccggagagacttactggaggggttcttg
gaaagtggggcagaagcaattgacgcatgcacctggcaccattactatgtcaacggaaga
cacacatctttaaaagatttcctagaccctgaggtgctaaacactttagccctgaaaaca
catgaagtcatcaagaccgttgatctagcatcccctgggaagaaggtgtggcttggagag
actagttctgcctatggaggcggggctaaggggctgtctgacacatttgtcgctggattc
atgtggctggataaactgggccttggtgcaaagcttggcttagatgttgtaatcaggcag
gttttgattggatctgggacttaccacctggtagatgataacctcgatccacttcctgat
tactggctatcagttctgtacaagaggcttgttggaccagaggtgctgagtatagaagcc
ttttccattttgggaaagacgaaaagagtacgggtctacctacactgcactaacaagaaa
agtacaagctacaaaagtggagcagtcacattgtttgctctgaacctgagtaagagccct
gctagcatcgctgtgcctgccatggtctctaacagcactgtagaggccttcgttcttcag
tctgaacagcctggcgaggagggactctactcgaagtctgtgaaactcaacggagaggtg
ttgaagatggtagatgaccgaactcttccatcgctccagggaactcctcttgctgcagga
gaacatctcagactgcctggttattcctttgccttctatctcctcagtgaggcccaggca
ctggcctgccgatga
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