Salvelinus namaycush (lake trout): 120044994
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Entry
120044994 CDS
T07522
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120044994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120044994
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120044994
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF3461
JAB
Motif
Other DBs
NCBI-GeneID:
120044994
NCBI-ProteinID:
XP_038845724
UniProt:
A0A8U0U9V0
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Position
Sna3:complement(14573868..14577512)
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AA seq
404 aa
AA seq
DB search
MEDSNSYIRVSGFVLGSLMFQHLNSDSDVEGLILGETKAEERSNITDSQIDNIQFEHTIN
IQKHISCRKLNSFYNRIGEVNQDEIRHILSNYKEENVIGWYKQRRNTDQQITFREQVVHE
NLKRALSNHELIFLLLTPSEITTSGSTHKLEYAVYRSHGSQYCSVPVLVSNLGLLEEQDY
WRLSASCSSVNYNHAVRKHRSKFFSSDGSLHEVDEINDMNNSLQGELKMACKKVEESERL
VEKLLADVSDLRRMVNDGKQELREISADGASTPAQPQENVLLCEVIKTLFPGESLLQTQA
LNFQGFPLPEFCCRTDHGIDIATTLPLILSHTLPKARKGRLGRGGGTSWRKRPLRESSEV
PKRRKGMLEETEESLSVSGSETEEDLIPPNQNGNNLDVSNSPVF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcaaactcttatattcgcgtctccggatttgttcttggttcattgatgttt
cagcacttgaacagtgattctgatgtggaaggtctcattctcggggagaccaaagctgaa
gagcgaagcaacatcactgactctcaaatcgacaacatacagtttgagcatacaataaac
attcagaaacacatatcatgtcgcaagctcaatagcttctataatagaataggggaggtg
aaccaggatgaaataaggcacattttatccaactataaggaggagaatgtgattggttgg
tataaacagcggagaaacacagatcaacaaattaccttcagagagcaagtagtccacgag
aacctgaagagagcactctccaatcacgagctgatctttctgctactgacacccagtgag
atcacaacatcaggctccactcacaaactggagtatgcagtctacagatcacatggcagt
cagtattgcagtgttcctgtcctggtcagcaacctgggtttgttggaagagcaggactac
tggagactctctgcatcttgttcatcagtcaactacaaccatgctgttaggaaacacaga
tctaaattcttctcctccgatggatctctgcatgaggtggatgagattaatgacatgaac
aactccttgcagggtgaactgaagatggcatgtaagaaagtggaggagagtgaacgattg
gtcgagaagctgcttgcagacgtttctgatctaagaaggatggtcaatgatgggaaacaa
gagctgagagaaatctcagcagatggagcctccaccccggcacagccccaggagaatgtg
ctgctctgcgaggtcatcaaaacactatttcctggggaatctctactccaaacgcaggct
ctaaacttccaggggtttccattgcctgagttctgctgcaggactgaccatggcatagac
atcgccacaacactgcctttgatcctgagtcatacactccctaaagccaggaaggggagg
cttgggagaggcggaggtacatcctggagaaaacgtccccttcgtgaatcatctgaggtg
cccaagaggaggaaaggcatgctggaggagactgaggagtctttgtcagtcagtgggtca
gagaccgaggaggatttgatcccacccaatcagaacggaaataatttagatgtatccaac
tccccggtcttctga
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