Salvelinus namaycush (lake trout): 120045005
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Entry
120045005 CDS
T07522
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120045005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120045005
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120045005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
HEAT_GCN1_C
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
120045005
NCBI-ProteinID:
XP_038845735
UniProt:
A0A8U0UAQ7
LinkDB
All DBs
Position
3:15201961..15269043
Genome browser
AA seq
2651 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQ
YKMSQNSMHGSPASTNYQQTTISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAA
YMQQYPHPPSYSQHQQIQQVASPMVPGGMRNIHDNKVSGQISSNSANHNARHGSNEDYMN
IVHRLGNEESDPSMRNASFPLRSPQSVCSPAGSEGTPKAGLRPSLILHSPHPYASPRDSA
PDLLLDSPDCKKKQKKLTKEEKEQLDKAAMYDIVSSPSKDSTKLTLKLSRVKSTEMDQSG
ELLPGAEDQDTDLAYNSLQFSRTQQDPAHRLGPGQGEQSGYQQVPVLQNTKQAGGVISGA
VYDDAEMDALAEIERIERETLIERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGATQ
PGVGGGNAGSKLAPQEASAASNGASRPALMVSIDLQQAGRADGQPEVNIGTHTPALRSWP
EERLCPGDGPDSTGVLRLNAKTEGDTLQTADVRPEVIKQRADTPKKLGPDVRPETPKHKH
ENRRDSSKHRHDGKPDNSKARPDARMPDKPRQRHEGRSDSGHREDRSRDSDPSRIRRPET
PSKSSRGEHDSKHGRDKDRERGDKDRERKHRTEAGDPRDRRSPEQRSRPESPRVKQEGRG
GVDHSGRQRTDRPGPNLKSPNKEERRSGDERRSGDGSRNRQDSKQQPAENKQEFPAYLLG
GVKSGGFKNFVIPKVKRDKDGHVLAAEIRKPGLGSVVEGWKEPRVKLERLGLVEKMKTAA
KPVVVLQKLSIDEVQKIIRERKDRSARSSKSSKSRPSHWISEKESTMPLCERVKMNKRKR
STIKEKPKYAEVNSDDDDDDDDSVTESTRKRHKKEREKTWEPDERERRGSGRRGSSSRHR
ERSPEDSYDESPPPSMSDLARKMKKKEKQKKRKAYEPKLTAEELMDSSTFKRFSASVDNI
LESLEDIDFNAMDDDEIPQELLLGKHQLSELASESAKIKAMGITFRLSSGKLVKVLNILE
KNIQDGSKLSTLMNHDADAEDEERLWRDLIMERVTKSADACLTALNIMTSARMPKAVYIE
DVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSRAKRAKSSTHKQRVIIMLYNKV
CDIVSNISELLEIQLLTDTTILQVSSMGITPFFVESVSELQLCAIKLVTAVFSRYEKHRQ
LILEEIFTSLARLPTSKRSLRNFRLNSSDKDGEPMYIQMVTALVLQLIQCVVHLPNNRDS
HDEYDKKVDQDVLITNSYETAMRAAQNFLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTV
NKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDGVTSKMDQRS
IDRILRETQGNDETQQLQKALLDYMDENAETDPSLVFARKFYIAQWFRDTLTEMEKAMKS
QNQRGDEDSSEGHHHAKDIETTGEIMQRAEARKKYLRNIIKTAPSQFSTLRMNSDTVDYD
DSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARLD
MQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKI
LRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKDAMTRKIL
NITDVVSACKDTGYDWFEQLLQNLLKTEEDAAYKPARKACVQLVDNLVEHILKYEESLTD
IENKGVNSNRLVSCITTLFLFSKIRSQLMVKHAMTIQPYLTTKCNTQSDFMVICNVAKIL
ELVIPLMEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNRVTRNYKFVWACFN
RYYGALTKLKTQHSEDSNNPVLAANKPALLRSLFTVGALCRHFDFDEEEFKGPTKVVIKE
KVMELLLYFTKHEDEEVQTKAIIGLGFQFIQYPGLMFMQDVMSLYNGILSDRKSSVNLKI
QVLKNLQTYLQEEDSRMQEADQQWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFF
HTQSTVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKADQQLVEIDKKYSG
FIHMKAVAGMKMSYQVQQAIWSAKGTVIRGYRQDETTSALCAHLFSMVRSNRQHRRAFLI
SLLNLFDDSSKIEVNMLLYMADNLACFPYQIQEEPLFIMHHIDITLSVSGSNLLQSFKES
LLKEPRQREKKSKERKYQSEEENSSSSSSSEEEHNRHSISSNSSDEDNEVVHRPRKPKHR
AQAPVKSDSDSDLEMEDLDKVMQRLPDNPIPLLDFANASQGILLLLVLKQHLKNLYGFSD
SKIQKYSPTESAKVYEKAVNRKGHVHFSPHQTLDFLTSDLANVELTYDIKRRIVKQYLDF
KLLMEHLDPDEEDEEGEASASANARNKAITSLLGGPSHQDHKNHHQDHKNHHQAPIETDD
DESDGDEKTPVSSRRSRKHGDSAEASGHMNETLAARDVIALCCPKYKDRPQIARIIQKTN
TGYRVQWMAGSYSGVWGEAKKRDGRKTVPWVDTIKESDIIYKKIALTSAHKLTNRVVQTL
RSLYSAKEGTS
NT seq
7956 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttact
gacttgttaaaccagctgcccctgccatcccctctccccgccaccaccactaagagtctg
ctgttcaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccacagagcacatagagctgaag
gataacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctg
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaaacc
actatctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccagg
ttcacgccccagcagaacagccctgtgcccagcccctatgctccccaaagccctgctgct
tacatgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaagtt
gccagccccatggttcctggcggcatgcggaacatccacgacaacaaggtctccgggcaa
atttcaagcaactcagccaatcacaatgccagacatggctccaacgaagactacatgaac
atagtccacagactagggaatgaggagagtgatccttccatgagaaatgcctccttccca
ctccgttcgccccagtctgtttgttcccctgctggcagcgaagggaccccaaaagcaggg
ttacgacctagcctcatccttcactccccacacccttacgcttccccccgtgacagcgct
cccgacctcctcctggactctcctgactgcaagaagaagcagaagaagctaactaaagag
gagaaggagcagttggataaagctgctatgtacgatatcgtcagctctccctctaaagac
tctaccaagctgaccctcaaactgtcccgggtgaagtccactgagatggaccagtccgga
gagctcctacctggggcagaggaccaggacactgacctggcctacaacagcctgcagttc
tcccggacgcagcaggaccctgcccacaggttagggccaggccagggggagcagtcaggc
taccaacaggtccctgtgctccagaacactaagcaggctggaggggtgatcagtggagct
gtttacgacgatgctgagatggacgcgcttgctgagatcgagaggatagaacgggagacg
ctcatagaaagggagcgctgctccaaagaggttcaggataaagacaagccactgaagaag
cggaagcaggactcgtatccccaagagcctggagctggaggtacagcgggggcaactcaa
cctggcgtgggagggggcaatgctggcagcaagctggcaccccaggaggctagtgctgcc
agtaatggtgcgagccggcctgccctaatggtcagcatcgacctgcagcaagcaggtaga
gctgacgggcagccagaggtaaacataggcacccacacccctgccctgaggagctggcct
gaggaacgcctgtgtcctggggacggccccgactctactggagtcctgcggctaaacgcc
aagacagaaggagacacactacagactgcagacgtccggccagaggtcatcaagcagcgt
gccgacacccccaagaagctgggccccgacgtccgaccggagacccccaaacacaagcac
gaaaacagacgagactcttccaaacatcgacacgatggcaaacctgacaatagcaaggcc
cgccctgatgccaggatgcctgacaagccacgacaacggcacgagggtcgctcagactct
ggtcacagggaggacaggtcccgggacagtgacccatcccgcatccgcaggccagagacc
cccagcaagtccagcaggggggaacatgactccaaacatggacgggacaaagacagggag
cggggggataaggacagggagaggaaacacaggacagaggcaggggatccacgggaccga
cgatctccagagcagcgctccaggccagagagcccgcgggttaagcaggaaggccgaggg
ggggtggaccacagtgggcgccagaggactgaccggccaggccccaacctcaaatccccc
aataaagaggagaggaggagcggggacgagaggaggagtggggacggcagcaggaaccga
caggactctaagcagcaacctgctgaaaacaagcaggagttccctgcttacctgctgggg
ggcgtaaagtctggaggctttaagaactttgtaattcccaaagtgaagcgggataaggat
gggcatgtgttggcagctgagataaggaagcctggtctgggttcagtagtggagggctgg
aaggagccccgggtcaagctggagcgactggggctggtagagaagatgaagacagcagcc
aaaccggttgtggtgctgcagaaactcagtatcgacgaggtgcagaaaatcatcagggag
aggaaagatagaagcgcacgcagctccaagtcctccaagagcagaccctctcattggatt
tctgagaaagagtccaccatgccactgtgtgagagggtgaagatgaacaaacgcaagcgc
agcaccatcaaggagaagcccaagtacgccgaggtcaactcagatgatgacgatgacgac
gacgactctgtgacggagtctacgcggaagcgtcacaagaaggagcgggaaaagacatgg
gagcctgatgagcgagagaggagaggctcagggcgcagggggtccagcagccgccaccgt
gaacgcagcccagaggattcatacgatgagtccccaccgcccagcatgagtgaccttgcc
agaaagatgaagaagaaggagaaacagaagaaaagaaaggcatacgagcccaagctgaca
gcagaagaactgatggactcctccacgttcaagaggttctcagccagtgtggacaacatt
ctggagagcttggaggacattgacttcaatgctatggatgacgatgagatcccacaggag
cttctgctggggaaacaccagctgagtgaactggccagcgaatctgctaagatcaaggcc
atgggcatcaccttcaggctttcatctggtaagttggtgaaggtcctgaacatcctggag
aaaaacattcaggacgggtccaaactctccacactgatgaaccatgacgcagacgcagaa
gacgaggagcgactgtggcgtgacctcatcatggagcgcgtgacgaagtcagctgacgcc
tgtctgactgccctcaacatcatgacgtcggcccgcatgcccaaggcggtgtacatcgag
gacgtgattgagagggtgctgcagtacaccaagtttcacctgcaaaacaccctctaccct
cagtatgaccctgtctacagagtggaccctcacggaggtggcttgctgagctccagggct
aagagagctaaaagctccacacacaagcagagggtgatcatcatgctctacaacaaggtg
tgtgacatcgtcagcaacatctctgagctcctggagatacagctgttgactgacaccacc
atcctgcaggtctcctccatgggcatcactccattctttgtggagagtgtcagtgagcta
cagctgtgtgccatcaaactagtgactgcggtgttctctcgctatgaaaaacacaggcaa
ctcatcctggaagagatcttcacctctctggccagactacccaccagcaaacgcagcctc
aggaacttcaggctgaacagcagtgataaggatggggagcccatgtacatccagatggtc
acagctctggtgcttcagcttatccaatgtgtggtgcacctcccgaacaacagggacagc
cacgacgagtatgataagaaggtggaccaagatgtcctgatcacgaactcttatgagacg
gcaatgcgagcagctcagaacttcctgtccgtcttcctaaagaagtgtggcagtaagcag
ggagaggaggactatcgcccactgtttgaaaactttgtccaggacctgctgtctacggtg
aacaaaccagagtggccagctgctgagcttctcctcagtctgctgggtcgtctactggtg
catcagtttagcaataagcagacagagatggctctgagggtggcatcgctagactacctg
ggcaccgtcgctgcccgcctgcgcaaagacggcgtcaccagcaagatggaccagcgctcc
atcgaccgcatcctcagagagacacaaggcaatgatgagacccagcagctgcagaaggcc
ctgttggactacatggatgagaacgcagagacggatccatctctagtttttgccaggaag
ttctacatcgcccagtggttcagggacactttgacagagatggagaaggccatgaagtct
cagaaccagcgaggggacgaggactcttctgaaggccaccaccacgccaaggacatcgag
accaccggagagatcatgcagagagccgaggcacgcaagaagtacctccgcaacattatc
aagaccgcgccctcgcagttcagcacactgaggatgaactctgacactgtggactatgat
gactcctgcctgattgtcagatatttggcctctatgaggccattcgctcagagcttcgat
atttatttaacacagatcctgagagtgctgggggagagtgccatagctgtcagaactaaa
gccatgaagtgtttgtctgaggtggtggctgtagaccccagtattctggccaggttggac
atgcagcgcggggtccatggtcgtctgatggacaactccaccagtgtacgcgaggctgct
gtggagctgctggggcgttttgtgttgagcagaccccagctcacagagcagtactacgac
atgctgattgagaggatactggatacgggtatcagtgtgaggaagagggtgattaagatc
cttagagacatctgtctggagcaacccaccttcaacaagatcactgagatgtgtgtcaag
atgatccgcagggtcaacgacgaggagggcatcaagaaacttgtgaacgagaccttccag
aaactctggttcacccctacacccaatcacgataaagacgccatgacccgcaagatcctc
aacatcacagacgtggtgtctgcatgcaaagatacaggctatgactggtttgagcagctg
cttcaaaacctgctgaagaccgaggaagatgccgcctataagccagccagaaaggcctgc
gttcagctggtggacaatctagtggaacacatcctaaaatatgaagagtctctcactgac
attgagaacaagggggtgaattccaaccgtctggtgtcctgcatcaccaccctctttctg
ttcagtaaaatccgatcccagctgatggtcaaacatgccatgaccatccagccttatctc
accaccaagtgcaacacccagagtgacttcatggtgatctgtaacgtggccaagatcctt
gagctggtgatccctctgatggagcacccctctgagaccttcctcaccaccatagaggaa
gacctgatgaagctcatcatcaaatacggcatgacggttgtacaacactgtgtgagctgt
cttggagctgtggtgaacagggtcactcgcaactacaagtttgtttgggcttgtttcaac
cgttactatggtgccctgaccaagctgaagacccagcactctgaggactccaacaaccct
gttctggctgctaacaaaccggccttgctgcgctcgctgttcactgtgggggcactctgt
cgccactttgactttgacgaggaggaattcaagggccccacaaaggttgtgataaaggaa
aaagtgatggagcttttgctgtacttcactaagcatgaagatgaggaagttcagaccaag
gccatcattggtctaggcttccagttcatccagtacccagggctgatgttcatgcaggat
gtgatgagtctgtacaatggcatcctgtcagacaggaagagctctgtcaacctaaagatc
caggtgctgaagaacctgcagacatacctgcaggaggaagactcgcgcatgcaggaggcc
gaccaacagtggaagaagctgtcgaagcaggaggacctgaaggagatgggtgacatctcg
tcaggtatgagcagctccatcatgcagctgtacctgaagcaggtgctggaggccttcttc
cacacacagtccaccgtacgacattttgctctcaacgtcattgccctgacactcaaccag
ggcctcatccatcctgtacagtgtgtgccctacctgattgccatgggaacagacccagag
cccaccatgaggaataaggcagaccagcagctggtggagattgataagaaatacagcggc
ttcatccatatgaaggccgtggcggggatgaagatgtcctaccaggtgcagcaggctatc
tggtcagctaagggtacggtgatccggggttaccggcaggacgagaccacctccgccctc
tgcgcccacctcttctccatggtccgatccaaccggcagcaccgccgagccttcctcatc
tcactgctcaacttgtttgatgacagctcgaagattgaggtcaacatgctcctgtacatg
gcagacaacctagcctgtttcccctaccagatccaggaggagcctctcttcatcatgcac
cacattgacatcacactgtctgtgtccggcagcaacctgctgcagtccttcaaggagtcc
cttctcaaagagccacggcagcgggagaagaagtcgaaagagaggaagtaccagtcagag
gaggagaactcgtcatcatcatcgtcatcggaggaggaacataaccgtcacagcatcagc
tccaacagtagtgacgaggacaacgaggtggtccacaggcccagaaagcccaaacaccgg
gcccaggcccctgttaagtcagactctgactctgacctggaaatggaggacttggacaag
gtgatgcagcgtctgcctgacaaccccattcccctgttggactttgccaacgcctcacag
ggaatactactactattggttctaaagcagcatctcaagaacctctacggcttctcggac
agtaaaatccaaaagtactctccgacggaatcggccaaggtatatgagaaggcggtgaac
aggaagggtcacgtgcacttcagccctcaccagacactggacttcttgacctctgacctg
gccaacgtagaactcacctacgacatcaagaggaggatcgtcaaacagtacctagatttc
aagttactgatggagcatttggaccctgatgaggaggatgaggaaggtgaggcgtcagcc
agcgctaacgccagaaacaaagccatcacttcattgctgggagggcccagccaccaggac
cacaagaaccaccaccaggaccacaagaaccaccaccaggctcctatagagacggacgac
gacgagagcgacggagatgagaaaaccccagtgtcatcgcggcggtcgaggaagcacggc
gactctgcagaggcttcaggtcacatgaatgagacattggccgccagggacgtcatcgcc
ctctgctgccccaagtacaaggaccggccgcagatcgcccgcatcatccagaagaccaac
acgggctacagagtgcaatggatggctggctcctactctggagtctggggcgaggctaag
aaacgggacggacgcaaaacggtgccttgggtggacactatcaaggagtctgacattatt
tacaagaaaatcgccttgacgagtgcacacaagctgacgaacagagtggtgcagacttta
cggtcactgtactcagcgaaggagggaacttcctaa
DBGET
integrated database retrieval system
