Salvelinus namaycush (lake trout): 120045008
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Entry
120045008 CDS
T07522
Name
(RefSeq) PDZ and LIM domain protein 7-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120045008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120045008
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120045008
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Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
120045008
NCBI-ProteinID:
XP_038845741
UniProt:
A0A8U0QJV6
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Position
Sna3:complement(16016675..16117979)
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AA seq
617 aa
AA seq
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MNSNYSVSLGGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDVVLSIDGIATN
GMNHLEAQNKIKACTDNLNLTLQKASSVPKADAPKDEPLEIIKPVPITHPAPAFTSPSPQ
PSVAYNKTARPFGGGSNVGAVTSSLTAPKVASIPSASSAFTPAAPSSQQPQPPFPLASRS
CSPAPPSSAPPPRPGSGRSPFTSTSSSSSSSSPARVTAPSSNPGAPQSSCYNTPINLYSN
TNACEVAIGQRRGLLEAQGVVVDQIKEQFNGNRVEPELTHASPLSEASKKRLIEDTEDWH
PRTGTSQSRSFRILAQITGTEKDQAQENSAGKNKVVENAPPSVHITTSVKTMTKVPGAPR
NGNSVPPPALKTPSAQVKPSWPAGGSAGFSKGGAGRVSNTAPVPTVPKVSDRPAPQAHPK
DQNSLVQRAEHIAAGTRTPMCGHCDKVIRGPFLVAMGMSWHPEEFNCSHCHASLVESGFV
EERGTVYCAHCYEKFFAPTCTSCQQKVLGEVINALKQTWHVYCFLCASCQQPIRNNTFHL
EDGLPYCERDYYQLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCNTSLEGQAFF
SKKDKALCKKHANTVKI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactacagcgtctccctgggtggccccgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcacggctgaccgatgggggcaaagca
gccaaagccaaaatgagtgtgggagatgtagttctgtctatcgatggaatcgccaccaac
ggcatgaaccacctggaggcccagaacaagatcaaagcctgcactgacaacctcaacctc
accctgcagaaagcttccagtgttcccaaggctgatgcaccaaaggatgagccactggag
atcattaagcccgtgccaatcacccatccagctccagccttcaccagcccctccccccaa
cccagtgttgcctacaacaagacggcccgcccctttggcgggggcagcaatgtgggtgca
gtcacttcctccctaaccgccccaaaggtggcctccatcccctctgcatcgtctgctttc
acccccgccgccccctcttcccagcagccccagcctcccttcccactagctagccgctcc
tgctcccccgccccacctagctcagccccaccccccagacccggctctggccgttccccc
ttcacctccacttcctcctcttcttcctcatcttccccggccagagtgacagccccctcc
tccaatcccggtgctccgcagtcctcttgctataacacgccaataaacctgtactccaat
accaacgcctgtgaggtggccataggacagaggcggggcctgttggaagcccagggtgtg
gtggtcgaccagatcaaagaacagtttaatgggaacagagttgaaccagagttgacccac
gcctcgcccctcagcgaggccagtaagaagcgtctgatcgaggacacagaggactggcat
cctcgcaccggaacctcccaatccaggtccttcagaatcctggctcagatcaccggcaca
gagaaagaccaagcccaggagaacagtgctggaaagaataaagttgttgagaatgccccg
cccagtgtccacatcacaacatcagtgaagaccatgaccaaagtcccaggagcccccagg
aatggcaacagtgtccccccacccgccttgaagaccccctctgcccaggtcaaaccctcc
tggccagctggaggctcagcaggtttctctaagggtggcgctgggcgggtcagcaacact
gcaccagtacccacagtacccaaagtttctgaccgccccgccccccaggcgcaccccaag
gaccagaactccctggtacagcgggccgaacacatcgcagcgggaacacgcacccccatg
tgtggccactgtgacaaggtcatcagaggtcctttcctggtggccatgggcatgtcctgg
caccctgaggagtttaactgttcccactgccacgcgtctctggtggagtctggctttgtg
gaggagaggggaacagtgtactgtgctcactgctatgagaagttcttcgcccctacctgc
accagctgccagcagaaggtcctgggggaagtcatcaatgccctgaagcagacatggcat
gtgtactgcttcctgtgtgcgtcctgccagcagccaatcagaaacaacaccttccacctg
gaggacgggctgccatactgtgaaagagactactatcaactctttggtaccagttgccat
ggttgcgactttcctatcgaggcaggagacaagtttctggaggcgttgggattcacctgg
catgatacctgcttcgtgtgtgcagtctgcaacaccagtttggagggccaagccttcttc
tctaaaaaggacaaggctctgtgcaagaaacatgccaatacagtcaagatctga
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