Salvelinus namaycush (lake trout): 120045061
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Entry
120045061 CDS
T07522
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120045061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120045061
03012 Translation factors [BR:
snh03012
]
120045061
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120045061
Translation factors [BR:
snh03012
]
Eukaryotic type
Release factors
120045061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
120045061
NCBI-ProteinID:
XP_038845827
UniProt:
A0A8U0QNP3
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Position
Sna3:complement(19231652..19239662)
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AA seq
446 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYHKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAATLFLCNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLTNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKAMEMGAVEILIVYENLDTMRYILRCHGAEGLAMAEKGTDEKTLYLTPEQE
KDKSHFTDKETGQDHELIESLPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcggataggaacgtggagatatggaagataaagaaattg
atcaaaagtctggaagctgctcgggggaatggcacgagtatgatatccctgatcatcccg
ccaaaggaccagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aacattaaaagcagagtcaacaggctctctgtgcttggagccatcacctctgtacagcag
agactcaaactctaccataaagtgcctcccaacggcttggttgtgtactgtggcaccatt
gtgactgatgagggcaaagagaaaaaagtcaatatcgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagcattgctc
tcagatgacagcaagtttggtttcattgtgattgatggaagtggcgccctcttcggaacc
ctacagggcaacaccagggaggtgctgcacaagttcacagtggacctacccaagaagcac
ggcagaggaggacagtctgccttgcgttttgctcgtttgaggatggaaaagagacataac
tatgtgcggaaggtggcagagacggcagccacgctttttttgtgcaacgacaaggtcaat
gtagcaggcatggtcttagctggttcagctgacttcaagacggagctcagccagtcagac
atgtttgacccgaggcttcaagctaagatcctgaagctggttgatatatcatatggtggg
gagaatgggttcaaccaggccattgaactgtctgcagaagtgcttaccaatgtcaaattc
atccaggagaagaaactaataggacgatactttgatgagatcagccaggatacggggaag
tactgctttggggtggaagacacactgaaagccatggaaatgggtgctgttgagatcctg
attgtttatgagaacctggataccatgagatacatcctacgttgccacggagcagaggga
cttgctatggcggagaagggtaccgatgagaagacgttgtatttgacgccagagcaggag
aaagacaagtctcacttcacagacaaagagactggtcaggaccatgagctgatcgagagc
ttgccattacttgaatggtttgccaacagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtcaaaggctttggtgggattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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