Salvelinus namaycush (lake trout): 120045102
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Entry
120045102 CDS
T07522
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120045102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120045102
03036 Chromosome and associated proteins [BR:
snh03036
]
120045102
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120045102
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120045102
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
C5HCH
Vps8_C_schizo
Motif
Other DBs
NCBI-GeneID:
120045102
NCBI-ProteinID:
XP_038845905
UniProt:
A0A8U0QM36
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All DBs
Position
Sna3:24388171..24426667
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AA seq
1983 aa
AA seq
DB search
MSSEMLSVPPGTSKLDVLVTKLHEFLAHAPEDDENRLVTESPDGMTNKDCVEPHSTDRTP
LEPQQTSTDTLKQSGCGSRRKPSVVIKHSGLDESGASNESDDDDDGLIINSNGYPDVTRL
PKGTVLVRPEPVENVRDDFRGPEFRCGKSGNLKRAFSRRRGGGEHLEIVSCTACGQQVNH
FQRDSFYQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFC
KKCILRNLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGHLWPDHRKRGRG
EGKSGHYDSHPRHSQNIPVGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNT
TFVKFIQGGMQQKQTTELKLQYLKTFQSVLKGLKKSQTALEEALLEEFREMGLPNGGENP
TFDDTDVPQQEQEGCVEIDISDKNGLNYLKKIAAEHLEENDSDSNGFMDDGRPSSSIEMK
GVLGTEIIPRRGRGRPRKNSKPGEDACNVTKQLVVQISPAPVEQEPLSGPPELEVEVELE
AEEEERKEKVEEREGDCESIELVTEGEYESAEGSESLELEEEPDNRRSPRVKTTPLRRPG
EGKTQPTPSGADSESDSDPDTSPDAEVPQGADEGGLGRGTDDSDSDEVPAVLQRAAMTRS
SDEAESDDGDHRSVTKKCLFGLKKNTPLSPERVVRKRKVPDRSSDSDSSSDDPDLQKEIK
TMTRPRGRPRKVKREDEPTPSKDSPQHRPRGRPRKVKKEDESTSSKEGNTQAAKPQSTPQ
SEHRTKQTPSSSSQEEGDLDSESSDDSGDQKIKPITEEVALLGAAAFHQSSGDEEQPQSG
PSWAAEDDDDPENRIAKKMLLAQIKANYSSGEDFSSDVESSHDDESDREEKEQEDGKDES
SDENGETSSLTSDSESSKTCHRHRLLRHKLSLDNGNPSDQKTAEENGIEQKVRKSRRTKG
EKLDNQSSDDNSQSQQEESGMSEELSQSENEGNEQMLKSSTSSTSRVERESVRSYLQKKQ
QPSYIVLSDSSVDKSDDEEKDGEEGDNKDTPKGRKKIRRIIVDEHLRSETQRALKEEEER
RRRLAEREQREDFREVIVIEDEASHVACPITTKLVLDQDEGTKEPLIQVHRNLVTRLKPH
QVDGVQFIWDCCCESVKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSKCMNFRTAL
VVCPLNTILNWVNEFEKWQVDMGADKVKVTELATLKRPQERYIALQRWQMDGGVMIMGYE
MYRNLTLGLKVIHGKFKKTFDSTLVDPGPDFVICDEGHILKNEASNISKAMSAIKTKRRV
VLTGTPLQNNLNEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPRDVRIMKNRA
HVLHAMLAGCVQRRDYSALTKFLPPKHEYVMAVRVTPLQYRLYCYYLDNFTGARSVVEGA
RGKAGTSLFKDFQILSRIWNHPWCLQLNYISKENKGHFDGKHQGKTERKEKENKGKVVNA
DKDSKDVEVILVWNSTSKGVDVEGDQRAGPLVPVVKALRASTSFRPDSPAADWYKSMLSD
SDATILGHSGKMVLLFEILQMAEELEDKVLVFSQSLITLDMIEDFLDLTNKAKNNRQSSL
YKGDGSWIRNTDYYRIDGSTSATSRMKWVQDFNDATNERGRLFLISTRAGSLGINLVAAN
RVIIFDASWNPSYDIQSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVV
DQQQIQRHFTLFELTELYMFEPDLLDDPNSEKKSKRTTPLLPKDMVLAELLQSCKGQIVC
YHEHESLLDHKEEEELSEADCKTAWAEYEAEGAFFLNKAEHSNTNVPSPSTSTMAVSLSS
LYKKTNGQLKNMIYSSCEKVNEAIKSLHSLLNLSLDDYVLRLWQDNPSLDEKQVRAVAQT
WKTSNDKERERRQAIHRDLLAKQQSLTMYIQTILASRKNEITHTATVTNHTPALTDSANK
PTQ
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagagatgctcagcgttcctcctggcacgagcaagctcgatgtgttggtgacc
aaactgcatgaattcttggctcatgctccagaggatgatgagaacagactggtgacagaa
agtcctgatggtatgacaaacaaggactgtgtggagccacactcaacagaccgaacccct
cttgagcctcaacagacctcaacagacaccttgaagcagtctggatgtggttccaggaga
aaaccttcagttgtgattaaacacagtggactggatgaatctggtgcttcaaatgaaagt
gatgatgatgatgatggcttgatcataaattcaaacggttatcctgatgtaacaagatta
cctaaaggcactgtactggtgaggcctgagccagtggaaaatgtcagagatgacttcaga
ggtcccgaattccgttgcggaaaatctggcaatctgaagagagctttttctaggagacgt
ggaggtggtgaacacttggagattgttagctgtacagcctgtggccagcaagttaaccac
ttccagagggactccttctatcagcatccagtactcaaagtacttatttgcaagtcttgt
ttcaagtattactcaagtgatgacatcagcaaggattgtgatggcatggatgaacagtgc
agatggtgtgcagaggggggaaacctgatctgctgcgacttttgccccaatgccttctgt
aagaaatgcattttgcggaacctggggcgaaaagagttgtctggcatcctggatgaggag
agtaagtggtactgctacgtatgcagcccagagcctcttctggacctggtcgtcgcttgt
gacaacgtccttgacaacttggggcatttgtggccagaccaccgcaagaggggcagaggc
gagggaaaatctggacattatgactcccatccaaggcattctcaaaacattcccgtgggt
cattggaaccatagtggcatggatggtcacgttgtgttcaactacaacacccttcaaatt
ccagaggagatggccaaaaaggctaaaaacctggtggactctacaaacaccgtaaacaca
acttttgtgaagtttattcaaggtggcatgcagcagaaacagacaaccgagttaaagcta
caatacctgaagactttccagtcagtactgaagggtctgaagaagtctcagacagctctg
gaggaagcccttttggaggagttcagagagatgggtttgccaaatggtggcgaaaacccc
acgtttgatgatactgatgtacctcaacaagaacaagagggttgtgtggaaattgacatt
tctgataagaatggccttaattacttaaagaaaattgcagctgaacatttggaagagaat
gattcagactcaaatggctttatggatgatggaaggccttcgtcctcaattgaaatgaaa
ggtgtccttggcacagagataattccccgacgaggtagaggcaggccgcggaaaaactca
aagcctggagaagatgcttgcaacgtgacaaaacaactggtggtgcaaatttcacctgcc
cctgttgaacaagagccactctctggccccccagagttggaggtggaagtggagttggag
gcagaggaggaagagagaaaagaaaaagtggaggaacgggagggagactgtgaatctatt
gaacttgtaacagagggggagtatgaatctgctgaaggaagcgaatctctggaactggaa
gaggaaccagataatagacgctcacctcgggtaaagaccacacccttgcgcaggccaggt
gagggcaagacccagccgaccccctcgggtgcggacagtgagagtgactcggaccctgac
accagccccgatgctgaagtgcctcaaggagctgacgagggagggcttgggagaggaact
gatgactctgactccgatgaggtcccagctgtcctccagagggccgccatgacgcgcagt
tcagacgaagccgagagtgacgatggagaccatcggagtgtgaccaagaaatgcctcttc
ggcctgaagaagaacacacccctctctccagaaagagttgtccgcaaacgcaaggtgcca
gaccgctcctctgactctgattcctccagtgacgatccggacctgcagaaggagatcaag
actatgaccaggcccagggggaggcctcggaaggttaagagagaggatgaacctaccccc
agcaaggatagtccgcaacataggcccaggggcagacctcggaaggtcaagaaagaggat
gaatctacatccagcaaggagggtaatacccaggcagccaagcctcaaagcacacctcaa
tctgagcatagaacgaagcagacgccatcctcttccagtcaagaagagggggacctggac
tctgagtctagcgatgacagtggtgaccagaagatcaagcctatcactgaggaggtggcc
ttactgggggcagcagctttccaccagtcatccggcgatgaagagcagccccagtctggg
ccttcttgggcagcagaagatgatgacgatccagaaaatagaatcgctaagaaaatgctc
ttggcccaaatcaaagccaactactcatcgggggaggatttctcttcagatgtggagtca
tcacatgatgatgagtctgacagggaagagaaggagcaagaagatgggaaagatgaaagc
tccgatgagaatggggagacttccagtttgacctctgactctgagtccagtaaaacatgt
cacagacatcgtctgctacgccacaagctcagccttgacaatggaaatccaagtgatcag
aaaaccgctgaagaaaatgggattgagcagaaagtcaggaagtctagaagaaccaaaggt
gagaaattggataaccagagtagtgatgataatagccaatcacagcaggaagagtctggt
atgagtgaagagctgagccaatcggagaacgagggcaatgaacagatgctcaaaagctct
acatcatctacctctagagtcgagagggaatcagtccgtagttatctacagaagaagcag
caaccctcatatattgtgctgtctgactccagtgtcgataagagtgacgatgaagagaag
gacggcgaggaaggggacaacaaagatacacctaagggccgcaagaagatccgcaggatc
atcgtagacgagcacctccgctcggagacccagagagccctgaaggaggaggaggagaga
cgcagacgcctggcagaaagagagcagagggaggacttcagagaggtgattgttattgag
gatgaggcatctcatgtggcctgtcccatcaccactaagctggtcctggatcaggatgag
gggacaaaggagccactcatccaggtgcacaggaacctggtgaccaggctcaagcctcac
caggtggatggtgtgcagtttatctgggactgttgttgtgagtctgtgaagaaggccaat
tcaacccctggatcaggctgcttactggcccactgcatgggcctaggaaagacactgcag
gtggtgacatttctccatacgatgctgcagtcaaagtgcatgaacttcaggactgccctg
gtggtgtgtccactcaacaccatcctcaactgggtcaatgagtttgagaagtggcaagtt
gacatgggagctgacaaagtcaaggtgacagagttggccacactgaagcgaccacaggag
cgttatattgccctgcagagatggcagatggatggtggtgttatgattatgggctatgag
atgtaccgtaacctcacactaggcctcaaagtcatccacggaaaattcaaaaagaccttt
gacagtactctagtcgatccaggtccagactttgtgatctgcgacgagggtcacatcctg
aagaacgaggcatccaacatctctaaagctatgagtgccattaagaccaaacggagggtg
gtgctgacaggcacaccactgcagaacaacctcaatgagtaccactgcatggtcaacttc
atcaaggaaaaccttctgggctcaatcaaggagttccggaatcgctttatcaaccccatt
caaaacggccagtgtgcagactccacccccagagacgtccgcatcatgaagaatcgcgcc
catgtccttcatgcaatgttggcagggtgtgtacagagaagagactactcagccttgacc
aagttcctgcccccaaaacatgaatatgttatggcagtgagggtgacccctctccagtac
agactgtattgctactacctggacaacttcactggagctaggtctgtggttgagggagcc
aggggcaaagccggaaccagccttttcaaggacttccagatactcagccgaatctggaac
catccctggtgtctgcagctcaactatatcagcaaagaaaataagggccattttgatggg
aagcaccaggggaaaactgagaggaaagagaaggagaacaaggggaaagtggtgaatgct
gataaagacagcaaggatgtggaggtgatcctggtgtggaacagcacatcaaagggtgtc
gatgtggaaggagaccagcgagcaggtccactggtcccagtggtaaaagcgttgagagcg
tccaccagtttcaggcctgacagtccggctgcagactggtacaagtcaatgctgagtgac
tctgacgccaccatcctgggacactcagggaagatggtgctgctgtttgagattctccaa
atggcagaggaactggaagacaaagtgttggtgttcagtcaatccttgatcacattagac
atgattgaagatttcttggacctcaccaacaaagccaaaaacaacaggcaatcatcccta
tacaaaggtgatggcagctggatcagaaacactgactattaccgtattgacgggtccacc
agcgccacatccaggatgaaatgggtgcaagatttcaatgatgccaccaacgagcggggt
cgtctgtttctcatctcgacaagagctgggtcccttgggatcaacctggtagcagctaac
agggtcataatttttgacgcttcgtggaatccctcctatgacatccagagcatcttcagg
gtgtaccgttttggccagctgaaggctgtgtttgtctaccgcttcttggctcagggcacc
atggaggaaaagatctacgaccggcaggtggccaagcaatcactgtcgttccgggtggtg
gaccagcagcagatacagagacacttcacactgtttgaactgacggagctctacatgttt
gagccagacctgctggatgaccccaactctgagaagaagagcaagaggaccacaccgctg
ctgcccaaggacatggtgctggcagagctgctgcagagctgtaaggggcagattgtctgc
taccatgaacacgagtccctgctggaccacaaagaggaggaggagctcagtgaggctgac
tgcaaaactgcctgggctgagtacgaggcagagggtgctttcttcttgaacaaggcagaa
cacagcaacaccaacgttcccagcccctccacctccactatggctgtcagtctgtcatcc
ctgtacaagaaaactaatgggcagctgaagaacatgatttattctagctgtgagaaggtc
aacgaggccatcaagtccctgcattccttactgaacctctccctggatgactatgtgttg
cgcttgtggcaagataacccaagtctagatgagaagcaggtgagagctgtggcccagacc
tggaaaaccagcaatgacaaggagcgggagcgacgacaggccatacatcgcgaccttctc
gcaaaacaacaatcacttacaatgtacatccagaccattttggccagtagaaaaaacgaa
attacccatactgccacggtcaccaatcacacaccagctctgacagattccgccaataaa
cctacacagtga
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