Salvelinus namaycush (lake trout): 120045163
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Entry
120045163 CDS
T07522
Name
(RefSeq) src substrate cortactin-like isoform X1
KO
K06106
cortactin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
snh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120045163
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120045163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120045163
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120045163
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
120045163
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120045163
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120045163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
TMEM210
Motif
Other DBs
NCBI-GeneID:
120045163
NCBI-ProteinID:
XP_038846031
UniProt:
A0A8U0UBP7
LinkDB
All DBs
Position
1:50821958..50846027
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AA seq
513 aa
AA seq
DB search
MWKAAAGQSVTVAVDDGGDDWETDPDFENDVSEKEQRWGAKTVEGSGHQEHINIHKLREN
VSSEHSDLRQKEQAAMPKASDGYGGKFGVQQDRMDKSAVGHEYQSKLSKHCSQTDTSKGF
GGKFGVQGDRVDKSAVGFDYAGKTEKHASQKDYSTGFGGKYGVQADRVDKTAMGFEYQSK
TEKHDSQKDYTKGFGGKFGVETDKVDKSAMGFEYQGKTEKHESQKDYVKGFGGKFGVQTD
RQDKSAVGWDHQEKLQLHESQKDYSHGFGGKFGIQKDRMDKCAGNFEDVEKPKPAYQRTK
PVETAGSSTGSIKARFENIAKQNEEEDKKRAEEERTRRQAKEKQEQEEARRKIEETAKAK
PASPASETIPTISPTPHAQQASPSCAPAAADPVYQDVGVYKDPAAEENGEELYEAEPTSR
HSAEQMYEEPPAQEEALYQIPDETGDAQTYEYGEDLGLTAVALYDYQAAGEDEISFDPDD
IITNIEMIDEGWWRGVCRGAYGLFPANYVEVRQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggcagcagcaggtcagtcagtcaccgtggcagtggatgacggaggtgacgac
tgggagacagacccagactttgagaatgacgtttcggagaaggagcagcggtggggggcc
aagacagtggaaggctccggtcaccaggaacacattaatatccacaagctgcgtgagaac
gtgtcgtcggagcacagtgaccttaggcagaaggagcaggccgccatgcccaaagcctcg
gatggctatgggggcaagtttggggtgcagcaggaccgcatggacaagtctgcggtgggc
catgagtaccagagtaagctgtccaagcactgctctcagacagacacatccaaaggcttc
ggggggaagtttggagtgcagggcgaccgcgtcgacaagtccgccgtcgggtttgactat
gccgggaagactgagaaacacgcgtcgcagaaagactactccacagggtttggggggaaa
tatggggtgcaggcagaccgcgtggacaagacggcaatgggctttgaataccagagcaaa
actgagaaacacgactcccagaaagattacaccaaaggttttggcgggaagttcggagtg
gagacggacaaggtggacaagagcgccatgggctttgaataccagggcaaaacagagaag
cacgagtctcagaaagattacgtgaagggctttggtggcaagtttggtgtgcagacggac
agacaggacaagtcagccgtgggatgggaccaccaggagaaactgcagctccacgagtcg
cagaaagactactcccatgggtttggagggaagtttggcatccagaaggacagaatggat
aagtgtgcaggtaactttgaggatgtggagaaaccaaaacctgcctaccagaggaccaag
cctgtggaaactgccggcagcagcacgggcagcatcaaggcccgcttcgagaacatcgcc
aagcagaatgaggaggaggacaagaagcgggcggaggaggagagaacccgccgccaggcc
aaggagaagcaggagcaagaggaggcgcggcgcaagatagaggagacagccaaggctaag
cctgcctccccggcttctgagaccatccctaccattagccctacccctcatgcccagcaa
gcctcaccttcgtgtgcacctgcagctgccgacccagtttaccaggacgttggtgtgtac
aaggatcctgcagcagaggagaatggggaagagctgtacgaggcggagcccacctcccgg
cactctgccgagcagatgtacgaggagcctcccgctcaggaggaggcactctaccagatt
cctgacgagacaggagacgcccagacatatgagtacggtgaggacttggggttaaccgca
gtggccctgtatgactaccaagcagctggtgaagacgagatctctttcgaccctgatgac
atcatcactaacattgagatgattgacgagggctggtggaggggtgtgtgccggggtgcc
tacggcctcttcccagccaattacgttgaggttcggcaatga
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