Salvelinus namaycush (lake trout): 120045320
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Entry
120045320 CDS
T07522
Symbol
lrit2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120045320 (lrit2)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120045320 (lrit2)
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Motif
Pfam:
LRR_8
Ig_3
I-set
ig
LRR_4
Ig_VEGFR-1-like_5th
Ig_2
LRR_5
fn3
V-set
VEGFR1-3_N_Ig-like
Fn3_ROS1
LRR_EndoS
LRR_14
Motif
Other DBs
NCBI-GeneID:
120045320
NCBI-ProteinID:
XP_038846130
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All DBs
Position
4:complement(4074724..4077676)
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AA seq
539 aa
AA seq
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METAMGRIPDNVPNDFSKIRIENSHLTELPRGSFSKVSALVSLWLNFNDITLMNIKSLEG
LTNLTELRLQGNKLRSVPWTAFQDTPNLKILDLKHNRLDVLPESALRQLPGLTYLDLSFN
QLTVISRDVFLNWPLLNTQERKGGKEASSGEANVVLALHDNPWLCDCRLKGFVEFIKSVS
PPLILMNSYLMCTGPSSRAGKFFHEVGLKTCMKPEASASETNMTVSLGDNVTLQCLVKAR
PDPAIHWSYSLKIIRGFTVSETRVDDETIRSQLVIPSLHLADRGVYTCFANNFIGNSSVS
VLVNIKSFNASSSGGAAMSLPPYPLASADENVYIDIRISKQTVYGITLEWYAATDNPAET
WFTIHLGKYHSDKKELTYIGPGINTYSVNDLLPVTKYEVCVTLKNQMPRTGQCIVFVTGS
DISQLEQREKLIHIIVIVCAMVLAVPVGMYACTTDTRCKFSCLDRCTEQCKRRRRQEKTL
RTNGERQGTFDSLQAASDEGLCGDSEEVMKKRSKSSDEKNNHRGKAQDLPETTTGAKLY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagctatgggacgaatcccagacaatgttccaaatgatttcagtaaaattcga
atagagaattctcatctgaccgaattaccccgcggctccttctctaaagttagtgccttg
gtgtctctatggttgaatttcaacgacatcaccctaatgaacatcaagagtctggagggg
ctgacgaatcttacagaactacggctacagggtaacaagctgcgttcagtcccatggaca
gcgttccaggatacgccgaacctgaagattttggacctgaaacataaccgactagacgtg
cttccggaatctgccctgagacaacttccaggcctgacctatttagacttatccttcaat
cagcttactgtcatatccagggatgtcttcctcaactggcctctcctcaacactcaggag
agaaaaggaggtaaagaggccagcagtggagaagccaacgttgttttagcgctgcacgac
aacccttggctgtgtgactgccgcctcaaaggtttcgttgagtttatcaaaagtgttagt
ccacctctaattctgatgaactcgtacctgatgtgcacaggccccagttccagggcggga
aagttcttccacgaagtcggtttgaaaacatgtatgaagcccgaggcctcagcatcagaa
accaacatgacggtgtcgctgggggacaatgtaaccctccagtgcttagtcaaagccagg
cctgaccccgccatacactggtcgtacagcctgaagattatacggggatttactgtctca
gagacccgtgtggacgatgagaccatcagatctcagctggtcatcccatccctgcacctg
gcggacagaggcgtctacacctgcttcgccaacaacttcataggcaactcctccgtcagt
gtcctggtcaacatcaagtctttcaacgcctcctcctccggcggtgccgccatgtctcta
cccccgtaccccctggcctcagccgacgagaacgtctacatcgacatccgcatctccaag
cagacggtctacggcatcactctggagtggtacgctgcgacagacaacccggcagagacc
tggttcaccatccacttggggaaataccactctgacaaaaaggagttgacatatatcggg
ccgggcatcaacacctattcggtcaacgacctcctaccggttactaaatacgaggtgtgt
gtaacgctgaagaaccagatgccccgcaccggccagtgcatcgtgtttgtaacaggaagt
gacatcagtcagctggaacaacgggagaagctcatccatattatcgtgattgtgtgcgcc
atggtgctggcggtgcccgtggggatgtacgcctgcaccaccgacactagatgtaagttc
agctgcctggaccgctgtacagagcagtgtaagaggaggagaaggcaggagaagaccctg
aggaccaatggggagagacaggggaccttcgacagcctccaggccgccagcgatgaagga
ctctgtggagactctgaagaggtgatgaagaagaggagtaagtcctccgacgaaaaaaac
aaccacaggggaaaagcacaagatctaccagagacaaccactggagcaaagctgtattag
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