Salvelinus namaycush (lake trout): 120045350
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Entry
120045350 CDS
T07522
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120045350
Pattern recognition receptors [BR:
snh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120045350
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GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PYRIN
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
120045350
NCBI-ProteinID:
XP_038846157
UniProt:
A0A8U0QPC1
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Position
Sna4:complement(9354934..9359488)
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AA seq
1131 aa
AA seq
DB search
MTTSVPDLLLAILEELVGKDLKKFHWYLAQSVPDGFPLIPKGHLENADRQDTVDTMVNTY
GHDVAMKISLEILRKMNQKDLTKMLTVDQQEAEVEVAAASIRVPDSPVYITCTAQTGGHV
VAPSLSGCHIGGPVHFNIRVNSLDEEPIVPSQASPAHFTMFPPEPVNTEDNDERIESCQN
KLKHNLRSRFFSVFEGLASHGNRKLLNQIYTELYITEAGSTEVNNEHEVRQIETASRRTA
TQETPIQCNDIFLPLLGQFIRTVLTKGVAGIGKTVSVQKFILDWADGKANQNLQLIFPLS
FRELNLIRKKRCSLIELLNGFFTETKETEISNYDNYQVLFVFDGLDECRLPLDFQNNDIL
FKITESTSVDVLLTNLIKGNLLPSAQLWITTRPAAANQIPPECVDKVTEVRGFNDPQKEE
YFRNRISDENLASRIITHIKTSRSLYIMCHIPIFCWISAIVLERKLEKAGSGEMPKTLTQ
MYSHFLAFQEKDMNLRLQGRGTPDPDWMRKSIMSLGKLAFQQLEKGNLIFYEEDLRECGI
HIGQASVYSGVCTEIFSEELTLCQGKVFCFVHLSIQEFLAALYVFLTFINDNVNLLAKQQ
SFLRRFPFGNSSSTSFYKAAVDKALQSESGHLDLFLRFLLGLSLESNQILLRGLLTQKIS
RSQTNKESVKYMKEKIKENPSPERCINLFHCLNELHDHSLVEEIQSYLGSGSLSRAKLSP
AQWSALVFVLLTSEEELDEFELKKYSRSEEGLLRLLPVVKASRTALLNRCKLTERCCEAL
ASALSSYSSHQRELDLSHNDLQDSGVKLLSAGLASPQCKLETLSLRRCKLTERCCEALAS
ALSSNSSHLRELDLSDNDLQDSGVMLLSAGLGSPHCKLEVVRLSLCSVTEEGCALLASSL
NSNPSHLRELDLSYNYPGDSGVKLLSAVLEDPHCKLEKLSVECCAEFRIRPGPQRYACEL
TLDPNTAHKELSLSEENRKVTRGKEQPFPDHPERFDYWRQVLCREGLDGRCYWEAECNGR
ALMGVAYRGISRSGEGHDCWFGRNAVSWSLNCSNDSYTAWHNDKSTAITISSLSNRVGVY
LDWPAGTLSFYSVSSNTLTHLHTFHSTFTEPLYPGFRLGWVDSSVSLCQVE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatctgttcctgacctgctactggctattctggaggagctggtaggaaaagat
ctgaagaaatttcactggtacctggctcagagtgtaccagatggctttcctctcatcccc
aagggccatctggagaacgctgacaggcaggacaccgtggatacgatggtgaacacctat
ggccacgatgtagctatgaagatctcactggaaatcctgaggaagatgaaccagaaggac
cttaccaagatgttaacagtagatcagcaagaggctgaggttgaggtagcagctgcctca
attcgggttccagactctcctgtctacatcacttgtacagctcagacgggcggccatgtt
gtggccccttcgctctccggctgccatattggtggtccagttcacttcaacatcagagtc
aactcattagacgaagagcccatagttccatctcaagcttcacctgcccactttaccatg
tttccacctgaacctgtgaatacagaagacaatgatgaacgaatcgagagttgtcaaaat
aaactcaaacacaatctgcgtagtaggttcttcagtgtgtttgagggactggccagccac
gggaacagaaaacttctcaaccagatctacacagagctctacatcacagaggctggaagt
acagaggtcaataatgaacacgaggtgagacagattgagacggcatccagaagaacagcc
acacaagaaacaccaatccaatgcaacgacatctttctgcccttacttggtcaattcatc
agaactgtgctgacgaagggagtcgctggcatcgggaaaaccgtctcagtgcagaagttc
attctggactgggcagatggaaaagccaatcaaaatctccagttgatattccctctttct
tttcgagagctgaatttgatcagaaagaaaagatgcagtttgatcgaacttctcaatggc
ttttttacggaaacaaaagaaaccgagatatcaaactacgacaattatcaggtgctgttt
gtctttgatggcctggatgagtgtcgacttcctctagacttccagaacaatgacattctg
tttaaaataaccgagtcaacctcagtggacgtgctgctaacgaacctcatcaaggggaat
ctgcttccctccgctcaactttggataaccacccgccctgcagcagccaatcaaatccct
cctgagtgtgttgacaaggtgacagaggtacgagggttcaatgacccacagaaggaagag
tacttcagaaatagaatcagcgatgagaacctggccagcagaatcatcacacacataaag
acatcaagaagcctctacatcatgtgccacatacccattttctgttggatctcagccatt
gttctggagagaaagctggagaaagcagggagtggagagatgccgaagaccctgactcag
atgtactcacacttcctggcttttcaggagaaagacatgaatctcaggcttcagggaaga
ggaacacctgaccctgactggatgagaaagagcatcatgtccctgggaaaactggctttc
caacaactggagaaaggcaacctgatcttctatgaggaagacctgagagagtgtggcata
cacatcggccaggcatcagtgtactcaggagtgtgtactgagatcttcagtgaggaactg
accttatgccagggaaaggtgttctgctttgttcatctcagtattcaggagtttctggct
gccctgtatgtgtttctcacattcatcaacgacaacgtgaatcttttagccaaacagcaa
tcatttctgagacgttttccattcggaaattcatcctcaaccagcttctacaaagcagca
gttgacaaggccttacagagtgagagtggacacctggacctgttcctccgcttccttctg
ggcctctcactggagtccaatcagattctcctacgaggcttgctaactcagaaaataagt
agatcacagaccaacaaggaatcagtcaagtacatgaaggagaagatcaaggagaatccc
tctccagagagatgcatcaatctgttccactgtctgaatgaactgcatgaccattctcta
gtggaggagatccaaagctacctgggctcaggaagtctctctagggccaaactctcacct
gcacagtggtcagctctggtctttgtgttgctgacttcagaagaggagctggatgagttt
gagctgaaaaaatactccagatcagaggagggtcttctgagactgctgccagtggtcaaa
gcctccaggacagcactactgaatcgatgcaaactcacagagcgatgctgtgaagcgttg
gcctcagcactcagctcatactcctcacaccagagagagctggacctgagtcacaacgac
ctacaggattcaggggtgaagctgctctctgctggactggcaagtccacagtgtaaactg
gaaacattaagcctgaggcgatgcaaactcacagaaagatgctgtgaagcgttggcctca
gctctcagctcaaactcttcacacctgagagagctggacctgagtgacaacgacctgcag
gattcaggagtcatgctgctctctgcaggactgggcagtccgcactgtaaactggaggtt
gtaaggttgtcactttgtagtgtcacagaggaaggatgtgctttgctagcctcctctctc
aattccaacccctcacacctgagagagctggacttgagctataattacccaggagactcg
ggagtgaagcttctctctgctgtactggaagatccacactgtaaactggagaaacttagt
gtggagtgctgtgctgagttcaggatcagaccaggaccacagagatatgcctgtgagctc
acactggacccaaacacagcacacaaagagctctcgctgtctgaggagaacaggaaggtg
acgcgagggaaagagcagccgtttcctgatcacccagagagatttgactactggaggcag
gtgctgtgtcgagaaggtctggatgggcgctgctattgggaggcagagtgtaatgggaga
gctctgatgggagtagcttacagagggatcagcaggagtggagagggacatgactgctgg
tttggacgaaacgctgtgtcctggagtctgaactgctctaatgacagttacacagcctgg
cacaacgacaagagcactgccataaccatctcctctctctctaacagagtaggagtgtat
ctggactggccggccggcactctgtccttctacagtgtctcctctaacacactgacccac
ctgcacacgttccactccacgttcactgagcccctctatccagggtttaggctaggctgg
gtggactcgtcagtgtccttgtgtcaggtagaatag
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