Salvelinus namaycush (lake trout): 120045353
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Entry
120045353 CDS
T07522
Name
(RefSeq) neurexin-1a-like
KO
K07377
neurexin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120045353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120045353
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
120045353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Syndecan
EGF
Motif
Other DBs
NCBI-GeneID:
120045353
NCBI-ProteinID:
XP_038846160
UniProt:
A0A8U0QMJ4
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Position
Sna4:complement(9560199..9639482)
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AA seq
1389 aa
AA seq
DB search
MDRWERRGVLPSPPPAQPGSPLRAPSPGPSGIRLSLPQEYDGTTAICQGFLLELDLYLAT
VHPAASGRERTVSRLSKVPQQSGPAHPLLLFSPSISHVTHGAADCTFSSRVKRESERDVG
GSRGEVLEFGGVSGQWGRFPVWNACCESILSFSVRTHSADGLLLYLDDEGFCDFLELLLL
HGKLRLRFSIFCAEPAEVSSGVAVSDGHWHAVRVKRDWRNTSLEVDGKMEGWAEVKSKRK
DMTVFSHTFMGGVSPELHASPLRLTSPGVRDHASFAGWLAGVTINGSVAVLEGSEGVTVG
NGCGPAHVCQNGGVCSVVEMRAVCDCTGTGYKGNDCSEGLAHLMIGDQGKLRAREDYVAT
FKGSEYFCYDLSPSPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVIN
LGSGAFEALVEPVNGKFNDNSWHDVKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTT
GYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQ
GDAKMKVSGIVAFKCESVATLDPVTFDTPESFVALSKWSAKKAGSISFDFRTTEPNGLML
FSHGKPRQQQRKDPRTPPTLKILVLVFKHQGWGHYGSANCSLLLFACDHLCGRILTTTGY
TQEDYTMLGSDDFFYVGGSPSKGPETIFAGLGLNDNEWHTVRVVRRGKSLKLTVDDLQSV
EGQMAGDHTQLEFHNVETGIVTEKRFMPAVPSNFIGHLQGLTLNGMPYVDLCKNGDIDYC
ELNAVIGYKSIVADPVTFRSRSSYVTLPTLQAYYSMHLFFQFKTTSPDGLVLYNRGDGND
FIVVELVKGYLHYVSDLGNGAHLIKGNSNSPLNDNHWHNVLISRDTNNLHTVKIDTKVTT
QTTMGAKNLDLKGDLYVGGVAKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALA
TTGQVERGCEGPSTTCQEDSCASQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRD
GGVIVYTWPPNERPSTRADRLALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVF
NVGTDDINIEETAKFVNDGKYHIVRFTRSGGNATLQLDDLPIIERYPSGNIDNERLAIAR
QRIPYRLGRIVDDWLLDKGRQLTIFNSQTTVTVGRGKEAGQFQGQMAGLYYNGLKILNMA
AEGHAHIRLEGSTRLVGDMPSSSITPQSSAAAGGNRLDPAANAGDITTTTVTNKKQGGGS
TQQSTDDLLVASAECPSDDEDIDPCDPSSAHPPLPEVKPFPGTSEVVRESSSTTGMVVGI
VAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSATQPNGSTKDKPLGIAKISKNK
NNKDKEYYV
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctgggagagacggggagttctcccatcgcctccaccagcacaaccggggtct
ccactacgcgccccttctcctggtcccagtgggattcgcctctccctgccccaggaatac
gatgggacgactgcgatctgccaggggttcctattagaactggacttgtacctggcaacc
gtccacccggctgcttcgggccgtgagaggacagtgagccggctgtccaaggtgccgcag
cagagcggccccgcccatcctctcctccttttctcaccctccattagccacgtgacgcac
ggagcagcagactgcaccttctcctcccgggtaaagagagagagcgagcgagacgttggg
ggatccagaggggaggtgctagagtttgggggggtttcgggacagtgggggcggttcccg
gtgtggaacgcgtgctgcgagagcattctgtcgttcagcgttagaactcacagcgcggac
gggctgctgctttaccttgacgacgaaggattctgcgacttcttggaactcttgttgcta
catggaaaactccgcctacgattctcaatcttctgtgccgagccagccgaggtgagttcc
ggggtcgccgtgagcgacggccactggcatgccgtgcgtgtgaaacgggactggaggaac
acaagccttgaggtggatggaaagatggagggatgggcggaggtaaagagcaaacggaaa
gacatgacagtgtttagccacacttttatgggcggggtttccccagagctccatgcctcg
ccgctccgcctcacttcccctggtgtaagagaccacgcctcttttgctggctggctcgct
ggggtcaccatcaacgggtcggtggccgttctggaaggatcggagggtgttaccgtggga
aacgggtgtgggccggcccacgtgtgtcagaacggaggggtgtgttctgttgtcgagatg
agggccgtctgcgactgtaccggcaccggctacaaaggcaacgactgcagcgaaggtctg
gctcacctgatgatcggcgaccaaggaaagctcagagcccgtgaggactacgtagcaacc
tttaaggggtcagagtatttctgctatgacctgtctcccagccccatccagtcctctagt
gatgagatcaccctgagctttaagaccctgcagaggaacggcctaatgctccacacgggc
aaatcagccgactacgtcaacctggccttaaagaacggagccgtgtcactggtcatcaac
ctggggtccggggccttcgaggccctggtggagccggttaacgggaagtttaacgataac
tcctggcacgatgtcaaggtcacacgcaacctgagacagcactcaggcattggacacgct
atggtaaacaaactccattgtttggtgaccatctctgtggacggcatcttgaccactacg
ggctacacccaggaagactacaccatgttgggctcagacgatttcttctacgtgggtgga
agtcccagtactgctgacctccctggatctcctgttagcaacaacttcatgggctgcctt
aaagaggtggtgtataagaacaatgatgtacggttggagctgtctcggctggctaagcag
ggagatgctaagatgaaggtgagcggtatagtggcgtttaagtgtgagagcgtggcgacc
ctcgatcccgtgacctttgacaccccagaatcgtttgtggcattgagcaagtggagcgcc
aagaaggcggggtcaatctcctttgactttagaacgacagaacccaacggactgatgctc
ttcagccacgggaaaccacggcaacagcaacgcaaagacccccgcacaccccccacccta
aagatactggtgttggtgtttaagcatcagggctgggggcactatggttctgctaactgt
agtcttctgctgtttgcctgtgaccatctctgtggacgcatcttgaccactacgggctac
acccaggaagactacaccatgttgggctcagacgatttcttctacgtgggtggaagtccc
agtaagggtccagagaccatctttgcagggctggggctgaatgataatgagtggcacact
gtcagagtggtgcgacgcgggaaaagcctcaaactcaccgtcgacgacctgcaatctgta
gaaggtcagatggcaggcgaccacacccagctggagttccacaacgtggagacaggcatt
gtgacggagaagcgcttcatgcctgctgtgccttccaacttcatagggcacctgcagggc
ctcaccctcaacgggatgccctatgtagacctctgtaagaacggtgacatcgactattgc
gagctgaacgctgtgattggttataagagcatcgtggcggacccggtgacgttcaggtca
cggtcgagctacgtgactctgccaacgctccaggcctactactccatgcacctgttcttc
caattcaaaaccacctcccctgacggactcgtactctacaacagaggagacggaaacgac
ttcatagtggtggagctggtcaaaggctacctccactatgtgtccgacctggggaacgga
gctcacctgatcaaagggaactccaactctcctctgaatgacaaccactggcacaacgtc
ctcatatccagagacaccaacaacctgcacactgttaagatagacaccaaggtcactaca
cagaccactatgggggccaagaacctggatctcaaaggtgacctgtacgtagggggcgtg
gctaaagagatgtaccgtgaccttcccaagctcgtccactcccgcgaaggcttccagggt
tgcctagcaaccgtcgacctcaacggccgattacccgacctgctggccgacgcccttgct
acgaccggacaggtggagaggggctgtgaaggtcccagtactacctgtcaggaagactcc
tgcgccagtcagggcgtgtgtttacagcagtgggagggatttagctgtgattgcagtatg
acatcatttgggggaccgctctgcaatgacgcggggaccacttatatctttggtcgtgac
gggggtgtgatcgtgtacacctggcctcctaacgagagacccagcacacgggctgaccgg
ctggcgctgggcttcagcacacagcagaaacacgctactctgctacgggttgacagcgcc
tcgggactgggggactacctacagctacagatagataaaggaaatatccgggtagtgttt
aacgtggggacagatgacatcaacattgaagagactgctaaattcgttaatgatgggaag
taccacatagttcggtttacccgcagcggaggcaacgcaaccctgcagctggacgacctg
ccaatcatagagcgctacccctcaggcaacattgataacgagcgcctggcaatcgctaga
cagagaatcccctatcggctcggtcgaatagttgacgattggctactcgacaaaggccgc
cagctgaccatcttcaacagccagacgacggtgacggtgggaagaggaaaggaagcaggt
cagttccagggtcagatggccggtctctactacaacggactgaagatactcaatatggcc
gccgagggacacgcccacatccgcctggagggcagcacacgattggttggggacatgccc
tcctcctccatcacgccccaatccagcgctgccgccgggggcaaccgattagatcccgcc
gccaatgccggcgacatcaccacgacaaccgtcacaaataagaagcaaggaggaggaagt
acgcagcagtcgacagacgacctgctggtggcatcagctgagtgtcccagtgatgacgag
gacattgacccatgtgaccccagctctgcccacccccctctcccggaggtcaagccgttc
ccggggacgtcggaggtggtgagggagtccagcagcaccacgggcatggtggtgggcatc
gtggcggccgccgccctctgcatcctcatcctgctctacgccatgtacaagtaccgcaac
cgcgacgagggctcgtaccacgtggacgagagccgcaactacatcagtaactctgccacc
cagcctaacggcagcaccaaggacaagccgctgggcatcgccaagatctccaagaacaag
aacaacaaagacaaggaatactatgtgtga
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