Salvelinus namaycush (lake trout): 120045409
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Entry
120045409 CDS
T07522
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120045409
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120045409
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Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_VEGFR-1-like_5th
Ig_2
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120045409
NCBI-ProteinID:
XP_038846215
LinkDB
All DBs
Position
4:complement(4080539..4084669)
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AA seq
656 aa
AA seq
DB search
MFQGFSLCFCLALLCLGRCVCSTCPFQCSCFFHTLSDGSKARSVLCNDPEITLVPPNFPA
DTSKLRIEKTAITRISSETFHYLNSLEFLWMSFNSLNSLNVDSFRGLGSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNSLATVPPEVLFTWL
SVKASQGDGESSKYILGLHDNPWLCDCRLYDVVQFQKSPSSSVILIDTRLRCADPESLSG
VLFSETALQKCQEPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVRAVSYRDSGKYICKATNFVGTADAIISLVITDSFKHEEQGGSSKT
RKQRVRKTGGFGKAAYQDKLVAKYIPPPTTPSIEPLGPGGFTGKYDIESYDISNSVADGE
MPGPPITETAMQEVEKVEVLSNLAANASSLQAPAPPEKRVVRSVKIIGDTDHTVSLNWRA
PAAKNTTEFSVLYAVFGERDMRRINVAAGKNRITIDGLVPRTKYIACVCVKGLIPKKEQC
VIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDIQES
YVTFETLSPGQKPRGMEGEYLAKQQPDESNRLLSARSSVDSEAICRPEGPPNEYFC
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaggttttagtctgtgtttctgcttggcattactttgcctcggacggtgtgta
tgcagcacgtgtccgtttcaatgtagctgtttctttcacactctatcggacggatccaaa
gcaaggagtgtcctttgcaatgacccagagatcactctggtcccacccaactttcctgca
gacacctcaaaactgcggatcgagaagactgccatcacaaggatctccagcgaaaccttt
cactacctcaacagtctggaatttctctggatgtctttcaattctctgaactctttgaat
gtagacagcttccgtggcctgggaagtctggatgagctgagactggaagggaacgctctc
acctcgttcccctgggaatctctcactgatatgcccgacctgaggctactggacctgcat
aataataagatatcgtcgatcccggccgaggcgaccatttatatcaagaacctgacctac
ctggacttatctagcaacagcctagccacggttcctcctgaggttctctttacgtggtta
tctgtgaaagcatctcaaggagatggggaaagttccaaatatattctaggtctccacgac
aacccgtggctgtgcgactgccggctctatgacgtggtccagttccagaagtctccatcg
tcatccgtgattctgatcgacaccaggctgcgctgcgcggaccctgagagcctgtcgggg
gtgctgttcagcgagacggcgctccagaagtgccaggagccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctgcgctgtgggaccatcggagtc
ccagtaccagagctgtcctggacccgggcagacggtaaacagatgaacggcactgttcag
gaggaagtttcaaaggagggaatcatttggtcaatcctgagtgtgcgtgccgtctcttac
agggactctgggaaatacatctgcaaagcgaccaacttcgtgggtactgcagatgccatc
atctccctagttatcacagactcctttaaacatgaggaacaaggtggcagctccaaaact
agaaaacaaagggtacggaaaaccggtgggtttgggaaagctgcctaccaggataaactt
gttgcaaaatacatacctccaccaaccacacccagcattgaaccactaggaccgggcggt
tttacaggaaagtatgatatcgagagctacgatatctcaaacagcgtggctgacggagag
atgcccggtcctcccatcacggagacggcgatgcaggaagtggagaaggtggaggtcctt
agcaacctggcagccaacgcctcttctttacaggcgccggcaccgccggagaaacgggtg
gtgcgttcggtgaagataatcggcgacaccgaccacaccgtctccctgaactggcgggcc
ccggcggccaagaacaccaccgagttcagcgtcctgtacgccgtgttcggcgagagggac
atgcggaggatcaacgttgctgcgggaaagaaccgtatcaccatcgacggccttgtgcca
aggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaaaaagagcagtgt
gtaatcttttcaacggacgaggcggccagcgcaagcggcacccagaagctcattaacgtg
gtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatcgtctgctgcggg
gcgctcaagaagcgctgtaaaaagctactggggaggaaatccaaagatatccaagaatca
tatgtgacattcgagaccctctccccgggacagaagcctagggggatggagggggagtac
cttgccaagcaacagccagacgagtccaacagactgctctctgctaggtccagtgtggac
tccgaggccatttgtaggcctgagggaccgcctaacgagtacttttgttga
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