Salvelinus namaycush (lake trout): 120045496
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Entry
120045496 CDS
T07522
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120045496 (nlrc3)
Pattern recognition receptors [BR:
snh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120045496 (nlrc3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
120045496
NCBI-ProteinID:
XP_038846319
UniProt:
A0A8U0QQT7
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Position
Sna4:complement(17801871..17815374)
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AA seq
1135 aa
AA seq
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MERNTHYNSILDRNKRIAWQEDCYVDLQSTPTSTSTKGEMEDVGWIQKHQGHLQRFITTP
LLEGALSHMRKLELLSQGEEAQVQAGGQLQDRVGTLTSILASMDPQGSNALQAFLENSDS
QMYRLITMHDLMVQEHKEALLLQYPTPSDSLYPGPCSPEFSSSRILLLVDGLSDLQQKEH
DLMQVEATRGARRHHVRQLALAKLLEPLTRVSLPPRVSLTVGVAGIGKSTLVGHFVRLWS
RGEICTDVSFVLPFAFWELNTGEKLSAERLVKRAFPHMTDPSLVLSGTCRTLLIFDGLDE
FRCPLDFSETVPCTDPKKEVSVDDLVTNIIRGNLLPEAAVWVTSRPAVASLIPGGLVDRL
TEIPGFSPKEIRLFLSHNFPKGDTASQIWTHLESNKIFMVMSYMPCICWIVAVTFGYLLE
SGWQEGLPRTCTELYSHFCAMRAEAGEPRGREPIKMDQLNGNNRKLLGSLGRLAFYGLLK
HKYTFSEQDMRAYGVDLPSTQGGLGTGVLIREDSPNCVAYRFTHLTVQEFLAATYYHICS
KRAIFDLFTESAMSWPKIGFQNHFRSALQRSQQAEDGHLDVFVRFLAGLLCPAAVRPLAG
LLALGKDDGGQRVWAAGLLQDLLGSGGAVVSLRSVNVAYCLQELQHTEVLRSVEEDLRCG
GLGWKLTRTHCTALAYLLQVSPECSEETNLSACLDYSTVKSLLPQLLYCSHLRLENNHFK
DDVMELLGSLLSAKDCHLQKISLAENAISNKGAKALSRALLVNRTLITLDLRSNNIGSKG
AKFLAEALKMNQVLVSINFQNNLIEEEGARALAEVLLSNRKLVSLNVQKNCIGADGARRI
AEALKTNRTLTELILSSNQLGDKGTAALAQALTVNHSLHSLHLQSNSISNKGMTALTKAL
RLNRGLICLNLRENSIGVEGAKDMARALQENSSLRHLDLTANLLHDEGVKAIAGAVKVNR
ALTTLRLQWNFIKCTATKSLAHALLTNSTMQLLDLQENAIGDEGVVALAGALKTNASLCT
LCLQGVSAGRSGAISMAEALMVNKTLHTLDLRGNSIGMEGAKALANALKTNRTLKSLNLQ
ENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRTNSPDCVVEI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaacacccattacaattctattctggacagaaacaagcgtatcgcatggcaa
gaggactgctatgttgacctccagtctacccccacctcaacttccaccaagggagagatg
gaagatgtgggctggatccagaaacatcaggggcatctgcagcgtttcattaccactccc
ctcctggagggggcgctgtcccacatgaggaagctggagctgctgagccagggtgaggag
gcacaggtacaggctggggggcagctgcaggatcgggtgggcaccctcacctccatcctg
gccagcatggacccccagggctccaacgctctccaggccttccttgagaactctgactcc
cagatgtaccggcttatcacgatgcacgacctcatggttcaggagcacaaggaggctctt
ctgttgcagtatcccacaccaagtgacagcctctaccctggcccctgtagcccagaattc
tcctcctccagaatcttgctcctggtcgacggcctctcggacctccagcagaaggagcac
gacctcatgcaggtggaggccacccgtggggcgcggagacaccacgtcagacagctggcc
ctggccaaactactggagcccctcacacgggtcagcctgccccccagggtctccctcacc
gtgggagtggccggcatcggcaagagcacccttgtgggacattttgtacgcctttggagc
agaggcgagatctgcacggacgtgagttttgtcttgccctttgccttctgggagctgaac
actggggagaagctgtcggccgaaagactggtgaagcgggccttccctcacatgacggac
cccagcctggtgctgagtggtacatgtcggacattgctgatcttcgacggtctggatgag
ttccgttgtcctctggacttctcggagactgtgccctgcacagaccccaagaaggaggtg
tcggtggacgacttggtcaccaacatcatccggggcaacctgctccctgaagcagcggta
tgggtgacctccaggccggcggtggcctcgttgattcctgggggactagtggacaggttg
accgagatccccggattcagcccgaaggaaatccggctgttcctgagccacaacttccct
aagggagatactgccagtcagatatggactcacttggagtccaacaagatcttcatggtg
atgtcttacatgccttgcatttgctggatagtggcggttacctttgggtacctgttggag
agtggctggcaggagggtcttcccaggacctgcactgaactctactcccacttctgcgct
atgagagccgaagcaggtgagcccagaggcagagagcctatcaagatggaccagcttaac
ggaaacaaccgcaagctgctgggaagtctgggccgactggccttctacggacttctgaag
cacaaatacaccttcagtgagcaggacatgagggcctatggagtagaccttccatccacc
cagggtggcctcggaactggagtactgatccgcgaggattccccgaattgtgtggcctac
cgcttcacccacctgactgtgcaggagttcttagcagccacatactaccacatctgctcc
aaacgtgccatctttgacctgttcaccgagagtgccatgtcctggcccaagatcggcttc
cagaaccacttcaggagcgccctgcagcggtcccagcaggcagaggatggtcacctggac
gtgtttgtgcggttcctggcggggttgctgtgtccagcagcagtgcggccgctggcaggc
ctgctggccctggggaaggacgatgggggccaaagggtttgggcggctgggcttctgcag
gacctcctgggcagcggtggtgctgtggtgtcactacgctcagtgaacgtggcctactgc
ctgcaggagctgcagcacacagaggtgctacgcagcgtggaggaggacctgcgctgtggc
ggtctgggatggaagctgacacggacacactgcacagcgctagcctacctgctacaggtg
tctccagagtgcagcgaggagaccaacctgtcggcatgtctggactactccactgtcaaa
agcctgctgcctcagctgctctactgcagccatctcagattggaaaataaccattttaaa
gatgatgtcatggaactgctgggaagcttactgagtgcaaaggactgccaccttcagaag
ataagtctggcagagaacgctatcagcaacaaaggggccaaggccctgagtcgagcacta
ctggttaaccggacgctaattacgcttgatctccgtagcaacaacattggatctaaaggc
gccaagtttctagcagaagccctcaaaatgaatcaggtcctggtgtccatcaatttccaa
aataatctcattgaggaggagggcgctcgggccctggctgaggtgctgctgtccaaccgc
aaacttgtctcgctgaatgtacagaagaattgtattggagcagatggagccaggaggatt
gcagaagcgctaaagacaaaccggacacttacagaactaattctgagcagtaaccagctg
ggggacaaaggcactgcagccctggcccaggccctgaccgtcaaccacagcctccactcg
ctgcacctgcagagtaactccatcagtaacaaagggatgactgcgttaaccaaggctctg
cggttgaaccgtggactcatctgtctgaacctgcgtgagaactcgatcggggtggagggg
gcgaaggatatggccagggcactgcaggagaacagctctctccggcacctggatcttaca
gccaacctgctgcacgatgagggggtgaaagccatagctggagctgtgaaggtcaaccga
gcgcttactactttacgtctccagtggaatttcatcaagtgcacagccactaaatccttg
gcccatgctctactcaccaactccaccatgcagctactagatctacaggaaaatgccatt
ggggatgaaggagtggtagctctggcaggagccctgaagaccaatgcgtctctctgtaca
ttgtgtctccagggtgtatcagcaggcaggagtggagccatctcaatggccgaggctcta
atggtcaacaaaaccctgcacactctggacctacgagggaactccatagggatggaggga
gccaaggctttggctaatgcactgaagacaaaccgaacactcaaatcattaaatctgcag
gagaactctctgggaatggatggagccatattcatcgccacagccctgaaaggaaaccac
cagctaacttatataaacttgcaggggaacggcatcggagagtcgggagcaaaggtcatc
tctgatgccatcagaaccaactctccagactgtgtggtggagatctga
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