Salvelinus namaycush (lake trout): 120045508
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Entry
120045508 CDS
T07522
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120045508
04517 IgSF CAM signaling
120045508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120045508
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
NGL family
120045508
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
VEGFR1-3_N_Ig-like
Ig_2
LRRNT
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
120045508
NCBI-ProteinID:
XP_038846336
UniProt:
A0A8U0QPI6
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All DBs
Position
4:19337723..19340350
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AA seq
752 aa
AA seq
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MRVVMVTSPSTPSPLLWLVQLLLWLHHHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPRATRATEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEMGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGISTLSN
KNNPSPLNQQGQDIPISCTQVPISSTTFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctccaccccttcccccctcctctggttggtccag
cttttactgtggctccaccaccatggacctcaggtaacagaggccgcgcccccatgtcca
aacccctgtagctgctccaatcaggcaagccgagtcatctgtacaaggaagagtttggtg
gaagtaccggacagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgataaagtctgacacattcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatccgacaaatcgaggtgggcgcgttcaatggcctgcccaacctcaatacc
ctggagctcttcgacaaccgcctcacgctggtaccgtcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccggcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggccgccttcgagggcctgttcaacttgcgtttcctgaacctgggcatgtgcggt
ctgaaggaaatccccaacctcacacccttggtccgactggaggagctagagctgtctggg
aaccagctggggaatgtccgtcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctcgaggaactcaacctgtcccacaacaccttgcactcgctgccccacgatctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgcgat
gtcctgtggcttagctggtggctgaaggagacggtgcccagtaacacaacatgctgtgcc
cgctgccacgcgcccccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctacgctcccgtcattgtagagccacccactgacctcaatgtcacagagggc
atggctgctgagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatgggtcgtatcgcgtcaggatctcagtccttcacgat
ggaactctgaatttcaccaatgtgactgtgcaggacacgggccaatacacctgcatggtg
accaactccgccggcaacactacggcaaccgcagtgctcaacgtgtctacctccgactcc
agcaaccctttcagctacttcaccaccgtcactgtggaaaccgtggaaactaacaatggg
gaggattccgctgcaaggcagtacatcaacgaaacctacgtaccgccagattacctgggt
cccactgtttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatct
cgctcatctctctcctctctgtcaccgcgagccaccagagccactgaaaaggcagtcaca
gtgtcgataatggaggtcacgaacatccctggcctggatgacgtgatgaagaccaccaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctggtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaacgtggaggatgagatgggtgccggggccgggagcggcatctcagggggatcg
accatgcaatctgggtgcggaggagacggaaccttgaggatgcatcacccggaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgtgatgggtttgagcattgggacaggggcaggcatcagtactctaagcaac
aagaacaacccgtccccactgaaccagcaaggccaggatatccccatctcctgtacacag
gttccaatctcctcaaccactttccagaccatgtccggaaatggcgccaacaccaaccct
ctttctgtttccccacctttgccgatgtccctccccatgtcccccatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
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