Salvelinus namaycush (lake trout): 120045573
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Entry
120045573 CDS
T07522
Name
(RefSeq) RPE-retinal G protein-coupled receptor-like
KO
K04254
retinal G protein coupled receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120045573
04030 G protein-coupled receptors [BR:
snh04030
]
120045573
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120045573
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Vision
Opsin
120045573
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
ECF_trnsprt
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
120045573
NCBI-ProteinID:
XP_038846404
UniProt:
A0A8U0UBU0
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All DBs
Position
Sna4:31213676..31248259
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AA seq
295 aa
AA seq
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MVSSYPLPDGFSDFDVFSLGSCLLVEGLLGFFLNAVTVAAFLKIRELRTPSNFLVLSLAL
ADMGISANATIAAFSSFLRYWPYGSDGCQTHGFQGFVTALASIHFIAAIAWARYHQYCTR
TKLQWSSAITLAIFIWLFTAFWSAMPLIGWGEYDYEPLRTCCTLDYSKGDSNYASYLIPM
AIFNMAIQTFVVMSSYQSIGQKFKKTGNPRFNTATPLKTFLFCWGPYGVLAFYAAVENAN
LVSPKIRMLAPILAKTSPTFNVFVYALGNENYSGGIWQFLTGEKTEVPQIENKFK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcttcctaccctttaccggatggtttctcagacttcgatgtattctctttggga
tcttgtctgctagtggagggtcttctgggattcttcctgaatgctgtgacagtcgctgct
ttcctcaaaataagagaactgagaacccccagcaatttcctagtcttgagtttggcatta
gccgatatgggcatctctgcgaacgcaaccattgccgctttctccagttttctgaggtac
tggccctatggctcagatggctgccagactcatggcttccagggtttcgtgacagctctc
gccagcatccacttcattgctgccattgcatgggccagataccaccagtactgcacaagg
acaaagctacagtggagcagtgccatcactctggctattttcatctggctgtttaccgcc
ttctggtccgccatgcccctcatcggctggggagagtatgactacgaacccctcaggaca
tgctgtacccttgactacagcaaaggagacagcaactatgcatcctacctaatccccatg
gccattttcaacatggccatccagacctttgttgtcatgtcctcctaccagtccatcggc
cagaaattcaagaagactggaaaccccaggtttaacactgccactcccctgaagacattt
ttgttctgctggggaccctatggagtcctggccttctacgctgctgttgagaatgccaac
ttggtctctcccaaaattaggatgttggctcctattctggcaaagacctctcccaccttc
aacgttttcgtgtacgccctgggcaatgagaactacagtggaggcatctggcagttcctc
actggggaaaagactgaagtgcctcaaattgagaacaagttcaaataa
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