Salvelinus namaycush (lake trout): 120045667
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Entry
120045667 CDS
T07522
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03440
Homologous recombination
snh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120045667 (eme1)
03460 Fanconi anemia pathway
120045667 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120045667 (eme1)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120045667 (eme1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
120045667
NCBI-ProteinID:
XP_038846529
UniProt:
A0A8U0QR86
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Position
Sna4:complement(58714794..58741833)
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AA seq
474 aa
AA seq
DB search
MGSYSDSTSDLDEDLPVYDFLQPGRSLSQASQSHTDQPDLVVLDSSHTDLPIGLADVMMI
SSDEEEDVPYIPLALRLKQRQEGLEPTSSTLSNGQDNHHSSPDPPGGLGLLAPNGHSESE
PIFTSYEILNSHRRKEKCGGPDWDDPEEAALPQLWPPPKPSSWARSTTSPAKRKPSKRTG
EEIQGSREELRREARERQQGDKEARMLQQEKQKAEKAALAEAVKALRPEECIKHMVVSVD
PALLQLEGGGPLLTSLQAMGCSCAIEKQPLPRSVNWVRRTPSTQTGEVLCIPEAHTVMQV
PVDDFINLIHSYTQAVVHLQLHTGVQVHFLSTWKEFSDHIAMATKAVAEAPFKREREKTG
FSFYLESEWAGGQKVDRAGKGLLQVWKRQIQQLNRVSQDMASAILAAYPSPQLLNQAYSR
CKSEREKLSLLSDLLIRRGEGVTSTTRRVGPELSKRLCLVMTSSDPQQTLDSTL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctacagtgactccaccagtgacctggacgaggatctccctgtgtatgacttc
ctccagcccggccgtagcttgagccaagcctcccagagccacacagaccaaccagacctg
gtggtcctggacagctctcatacagacctccccatagggttggctgatgttatgatgatc
agtagtgatgaggaagaggacgttccctatatccccctggcgctgagactcaaacagaga
caggagggtttggagcctacatcctccactctcagtaatggacaggacaaccatcactcc
tcacctgaccctcctggtggtttaggtctgttggcaccgaatggtcactcagagtccgaa
cctattttcacctcatacgagatcctaaacagtcatcgtaggaaggagaaatgtggagga
ccagactgggatgacccagaggaggcagctctccctcagctgtggcccccaccaaagcca
tcctcctgggctaggagcaccacctcccctgccaagaggaagccctccaagaggactggt
gaggagatccaggggtccagggaggagctgaggagggaggccagggagaggcaacagggg
gacaaggaggcgcggatgctgcagcaggagaagcagaaggcggagaaggcggccctggca
gaggctgtgaaagcactgcgaccagaggagtgcatcaaacacatggtggtgtctgtggat
ccagctctgttgcagttggaaggtgggggccctttgctgacgtcactccaggccatgggc
tgcagctgtgccatagagaaacagcccctccctcgcagcgtcaactgggtcaggagaaca
cctagcactcagacaggtgaggtgttgtgtatcccggaggcccacacagtgatgcaagta
cctgttgatgacttcatcaacctgatccacagctacactcaggccgtggtacacctgcag
ctacacacgggggttcaggtgcatttcctgtccacctggaaggagttctctgaccacatc
gccatggcaaccaaagcagtagctgaggccccattcaaacgagagagggagaagacaggc
ttctcgttctacctagagagtgagtgggctggaggccagaaagtggacagggctgggaaa
ggactgctgcaggtctggaagagacagatccagcagctgaacagagtcagccaagatatg
gcctctgccatcctcgctgcctacccctctccacagctactcaaccaggcgtacagtcgg
tgcaagtcagagcgtgagaaactgtcactgctatcggacctcctgattcgcagaggggag
ggcgtgacttccacaactcgccgggttggtcctgagctctccaaacgtctctgcctggtg
atgacatcatcagacccccagcagaccctggactccacgctttga
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