Salvelinus namaycush (lake trout): 120045824
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Entry
120045824 CDS
T07522
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04136
Autophagy - other
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120045824 (atg13)
04136 Autophagy - other
120045824 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120045824 (atg13)
03029 Mitochondrial biogenesis [BR:
snh03029
]
120045824 (atg13)
Membrane trafficking [BR:
snh04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120045824 (atg13)
Atg1 complex
120045824 (atg13)
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120045824 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
UL42
Motif
Other DBs
NCBI-GeneID:
120045824
NCBI-ProteinID:
XP_038846688
UniProt:
A0A8U0QMU1
LinkDB
All DBs
Position
1:54304458..54313798
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AA seq
512 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRMQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMRPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQPPVLVGAADFCHPYTLNAANPHQMGIPG
KEGGVPQQVPVQPCHGTQAEHGRVSSCPPADHVPATPSSSGEDAETSSRSIEVKSVSPCD
VLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDPEENDPMVQPPESPATSSPLQ
GSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSS
QSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtgcaggtgatagtccaagcgcgtcttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacatgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctataac
cgcctgtcattactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaatgcaaggccatgactatgtcatactgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtcggagttgtgggaactccc
attggaaccatcaccttgtcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaagaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctctcttatcagcctcctgttcttgttggagctgct
gacttctgccacccttacaccttaaacgctgccaacccacaccagatgggtattccaggg
aaggaggggggcgtaccccagcaggtgcctgtgcagccttgtcatggtacccaggcagag
catggacgagtgtcctcatgcccccctgctgatcatgttcccgccacgccctccagcagt
ggtgaggatgcagagacctcgtcgaggagcattgaggtgaagagtgtctctccctgtgat
gtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacag
gtaaccacagcaagcctggacttaccatttgcagcttttgctcccagagcctatgacccc
gaggaaaatgaccctatggttcagccgccggagtccccagccacgtcctctcccctgcag
ggcagtttgcactcccagggctctggtgagagtggaggcccggcacaggacgactttgtt
atggtggactttaagcctgcattctctaaggatgacctccttcccatggaccttggcaca
ttctacagagagttccagaaccccccacagctcgccagcctcactattgatgtcagttct
cagtccatggcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaac
attgatgaatttgatgcatttgtggacacattgcagtag
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integrated database retrieval system
