Salvelinus namaycush (lake trout): 120045838
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Entry
120045838 CDS
T07522
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120045838
04090 CD molecules [BR:
snh04090
]
120045838
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120045838
CD molecules [BR:
snh04090
]
Proteins
120045838
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
DUF2207_C
DUF948
EMYY_lipop
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
120045838
NCBI-ProteinID:
XP_038846698
UniProt:
A0A8U0QP74
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All DBs
Position
4:33149850..33173931
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AA seq
830 aa
AA seq
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MGACRSVWRLGGCARVVLAWIGALLLGSSLALPLPATCPKGVSPLNLIQTQYQSIPGADT
GFMSGVVQSFLHTVQPNPFPKDLLVKLVEKGGNIYDDKKTINEVLLYEVGFLVCAAIGIV
YIILMPLVGFCLACCRCCGNCGGHMYQEQTKAVHCHRRGLYWATLLTTLVILAGNICMFF
TNQLLKVSVEDSSVELNNNLDNLQTYLTAVPQQIDSVLIESNKTVDEVTRSLNDIGPLLG
REIQRSLEGPLIPALKSVRDIAKVVNRTSVLLVGLNSTLTQLQSDVTVVQANVSSVRDRI
NSTLRDPDCNGCSAYQSELEKLTFDTTITIPSLNELQSAVDDVTRANLNSKVKEGEYLFA
SIPQRVTNDTKDMVQNVKQQLEVIKRQISLVKGYIPVSALSKISDTLGKAQRYIDMYSPQ
AKWVEMIRWGVGIILSCVVLLVVVCNLLGLFLGLVGLSPQDDPTERSGTANCAGTFLMAG
AGLSFLFSWLFMLVVFILFILGGNVYTLVCQPWHSGQLLQFVDTPGLIPGFDLREILGLK
SNLPLIEVYNECEQNRPLWTTLHLYELIDLNDLLNVSKYREEIQQHFDSNEIKLPTITLL
TPEIRKQLHGFSDMVHDADLSSVTQQINVISSINLTEIAGMLDQLATVQINTGIQNQLTQ
EAGGLRGIQSGIVTAIIPQLTQLNSNIYALSVIASEINGTVGDVLNKVGTAQDFLNTNTT
QIVKAASREFLDCQMGYFTTYADWANLTITQQIGLCGPVAQAVDSAKVVVCSNMMESLNA
FWFSLGWCMIFLVPSIIFSIKLAKFYRRMKHSDVYENHIAMNIPPRAKPY
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatgtaggagtgtttggaggttggggggctgcgccagggtggtgttggcctgg
atcggggctctgttgctggggtccagcttggccctgcctctccctgccacctgtcctaag
ggtgtctctcccttgaacctgatccaaacacagtaccagtcaatcccaggagcagataca
ggcttcatgtccggggtcgtccagtccttcctccacaccgttcagcccaaccccttcccc
aaagatctgctggttaaattagtggagaaagggggcaatatatacgatgacaagaagacc
atcaacgaggtccttctctatgaagttggtttcctagtgtgtgctgctatagggatcgtg
tacattatccttatgcccctggtggggttctgcctggcctgctgtcgctgctgtggaaac
tgtggaggacacatgtaccaggaacagactaaagctgtccactgtcacaggagaggatta
tactgggctacactactcacaacactagtcatacttgcagggaacatctgcatgttcttc
actaaccagttactgaaagtgagtgtcgaggacagctctgtagaactcaacaataacctg
gacaacctccaaacctacctcactgctgtcccacagcaaattgacagtgtgctgatagag
agcaataagacagtagatgaggttaccagaagcctcaatgacataggtcctctgctgggc
agagagatccagagaagtctagagggtcccctgatccctgccctgaagtctgtcagagat
atagccaaagtggtgaaccgtaccagtgtcctgctggtggggttgaactctactctaacc
cagctccagtctgatgtgactgtggtccaggctaatgtttcctctgtcagagaccgcatc
aacagcacactgagagaccctgactgtaatgggtgttctgcctatcagtcagagctagag
aaactaacatttgacaccactatcactatccccagtctgaatgagctgcagtcggctgtt
gatgacgtcaccagggctaatctcaactcaaaagtgaaagagggagaatacttatttgcc
agtattccccagagagtgaccaacgacaccaaggacatggtacagaatgtgaagcagcag
cttgaagtcatcaagagacagatctctttggtgaagggatacatccctgtctctgccctc
agcaaaatctcagacacactgggaaaggctcagagatacatcgacatgtactcaccacag
gcaaagtgggtagagatgatcaggtggggtgtgggtattatcctgagctgtgtagttctc
ctggtcgtagtgtgtaaccttctgggtctgtttttgggtctggtgggactgagccctcaa
gacgacccgacagaacgatccggcaccgccaactgcgcaggaaccttcctaatggcgggt
gcagggctaagtttcctgttctcctggctctttatgctggtggtgtttatactgtttata
ctgggagggaatgtctacacactggtttgccagccctggcacagtggacagctactacag
tttgttgacactccgggcctgatacctggattcgatttaagagagatactgggcctgaag
agcaacctgcctctcattgaagtatacaatgaatgtgaacagaacaggcctctatggaca
accctccacctgtatgagctcatagacctcaatgatctactcaacgtgtccaaatacaga
gaagagattcagcaacactttgacagtaatgagatcaaactgcctaccatcaccctgctc
acacctgagatacgcaaacagctacacggcttctccgacatggtccatgatgctgactta
agctctgtcacacagcagatcaacgttatttccagcattaatctgacagaaatagcaggc
atgttagaccaacttgctactgttcaaattaatacaggtattcaaaatcagctgacacag
gaggctggaggcctgagagggatccagtcaggcattgtcactgccatcatcccacaactg
actcagttgaactccaacatatatgccctcagtgtcatagcatcagagatcaatggcaca
gtaggagatgtgttgaataaagtgggaacagctcaagacttcctcaacaccaacactaca
cagatagtcaaggccgcaagtagggagttcctagactgtcagatggggtacttcacgacg
tatgctgactgggctaacctcacgatcactcaacagattggtctctgtggcccagtggca
caagctgtggactcagcgaaggttgtagtctgctcaaatatgatggagtctctgaatgcg
ttctggttcagtctgggctggtgtatgatcttcctggtccccagcatcatcttctccatc
aaactggccaagttctacaggaggatgaagcacagcgatgtctacgaaaaccacatagcc
atgaacatccccccccgagccaaaccctactga
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