Salvelinus namaycush (lake trout): 120045861
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Entry
120045861 CDS
T07522
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120045861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120045861
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120045861
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
120045861
NCBI-ProteinID:
XP_038846722
UniProt:
A0A8U0QNN4
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All DBs
Position
Sna4:complement(40449141..40514773)
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AA seq
815 aa
AA seq
DB search
MSTYNISLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAQQGNLVQGDIIVAIDGVSTEG
MTHLEAQNKIKCASFNLALTMQKSKRPALQSATPRIDFPMQQIPHQKVIFNTPANNDYIP
NFNPNALKDTALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQSKGHE
GGSLPVKDAQVDSASPVYQAVIKTADRDMELNDWARSSSQVQSKSFRLLAHITGTEFMQD
PDVEHLRKSREKFDTEFKGPRFAKLKNWHNGLSAQILNVPEKNPAPHLSLCLLALLRPIR
WLHLLLRSLQSPPPEQPPPATQTQPVAPEAPTVPSGAPRHLTHAASHISSALITQSRNKV
YKQGPPPTSALEALSITPVFRTSTLPKRKRTLPSGKPKHLSYSLQQSASGYSSQYKSSVS
SQYGQAPPMQQAPPMYQGQSMYQGQSMYQGQSMQQGPPMQQGPPMYQGPPMQQGPPMQQG
PPMYQGPPMHQAPHMQQPPMQQPPHMQQPPHMQQPPHMQQPPHMQQSSIQIPVGPPPPKV
VSTACIVPAPAPVPPQAAAPEPPSSRPPWITDDSFANKFDPSKTTSTSMKVPALPQSGPA
YNPSPAPYNPTPAPFNPVARGVAQRAERFAANSNRAPLCGACNNMIRGPFLVALGRSWHP
EEFNCHYCHTSLADCSFVEEQNAVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTT
CFVCAACGKAFGNSLFHMEDGEPYCEKDYISLFSTKCHGCDFPVEAGDKFIEALGHTWHD
TCFVCAVCNLNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctacaacatttctctgagtgggccggccccgtggggcttccgattgcaggga
gggaaagacttcaacatgcccctgaccatctccaggatcacccctgggagcaaggcacag
cagggcaacctggtccagggtgacatcatcgtggccatcgacggggtcagcactgagggt
atgacccacctggaggcccagaacaagatcaagtgtgccagctttaacctggccctcacc
atgcagaagtcaaagcgcccagctttgcaaagtgccaccccaagaatcgactttcccatg
caacagatccctcaccagaaggttattttcaacacgcctgccaacaacgactacatcccc
aacttcaaccccaatgcgctgaaggacactgccctgtccacccacaagcccatcgaggtg
aagggtcctgggggcaaggccaccatcatccatgcccagtacaacacccccattagcatg
tactcccaggacgccatcatggacgccatcgccggacagtcccagtccaagggccacgag
ggcggttcactccctgtaaaagacgctcaggtagacagtgcctccccagtgtatcaggct
gtcatcaagactgcagacagggacatggagttgaatgactgggcccgcagctcctcccag
gtgcagtccaagtccttccgcctcctcgcccacatcacgggaacggagttcatgcaagac
ccagacgtggaacatctgaggaaatcaagggaaaagtttgacacagaatttaaaggccca
cgttttgccaaattgaagaattggcacaatggcctgtctgctcaaatccttaacgtgcca
gaaaaaaaccctgccccgcacctgtcgctctgcctgctagcgctgcttcgcccaatcagg
tggcttcacctgctgcttcgcagtctccagagcccgccccccgagcagccacccccagcc
acccagacacagccagtggcccctgaggcccctacagtcccctctggggcacctcgccac
ctgacgcatgcagcctcccatatctcgtctgctttgattacacagtctagaaacaaggtt
tataagcaagggccaccgcccacctctgcgctggaggctctgtcaatcaccccagtgttc
cgaaccagcactttgcccaaacgaaagcgcaccctgccctctgggaaacccaagcacctg
agctacagcctgcaacagtctgcctctggttacagctcccagtacaaatcctcagtctcc
agccaatatggccaggctccccccatgcaacaagcccctcccatgtaccaggggcaatcc
atgtaccaggggcaatccatgtaccaggggcaatccatgcagcaggggcctcccatgcag
caggggcctcccatgtaccaagggcctcccatgcagcagggacctcccatgcagcaggga
cctcccatgtaccaggggccccccatgcaccaggccccgcatatgcagcaacctcccatg
cagcagcctccacacatgcagcagcctcctcacatgcagcagcctcctcacatgcagcag
cctcctcacatgcagcaaagctccatccagatccctgtgggccctcccccacccaaggtg
gtcagcaccgcctgcatcgtgccagctcctgcccctgttccaccccaagccgccgcccct
gaacccccctccagcaggcccccttggatcactgacgactcttttgccaacaagtttgac
cccagcaagaccaccagcaccagcatgaaagtgcctgctctacctcagagtggccctgcc
tataacccaagccctgccccctacaaccccacccctgcccctttcaatcctgttgcccgg
ggcgtggcccaaagggcggagcgcttcgctgccaacagcaacagagcacccctctgtgga
gcctgcaacaacatgatcaggggacccttcctggtggccctgggtcgatcctggcaccca
gaggagttcaactgtcactactgccacacatcgctggcagactgcagctttgtggaggag
cagaacgcagtgtactgtgagaactgctacggcgagttctttgcccccacctgtgcccgc
tgcaacaccaagatcatgggggaggtgatgcatgctctgcggcagacatggcacaccacc
tgctttgtgtgtgctgcctgtggcaaggcctttggaaatagcctcttccacatggaggac
ggggagccctactgcgagaaagattacatttcactcttcagcaccaagtgccatggctgt
gacttcccagtagaagctggagacaagtttattgaagcactgggtcatacctggcacgac
acctgctttgtctgtgcggtgtgcaatttgaacctggagggccagcccttctactccaag
aaggacaagcccctgtgcaagaagcacgctcacgccatcaacgtgtag
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