Salvelinus namaycush (lake trout): 120045966
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Entry
120045966 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120045966
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120045966
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120045966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_10
zf-RING_UBOX
ANCHR-like_BBOX
DUF4407
zf-RING_5
DUF7644
Motif
Other DBs
NCBI-GeneID:
120045966
NCBI-ProteinID:
XP_038846815
UniProt:
A0A8U0UBR1
LinkDB
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Position
Sna4:66266362..66285792
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AA seq
644 aa
AA seq
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MADTENESKSKPDQKLCCTVCSSALNKDKPATCGHSVCASCLGKKGKGCPQCLQSSGKPE
TAPVEQNGTLNGMVAESPPVIKTKEKYEKDIEAQDSKTAEETMIQEDLKEAEDPKKTEEE
KRKEKEKLLGLDDVVCDSCMETSPCMALKSCHTCLVSYCEAHLRPHLENPKFQNHRLVEP
LRDIERRTCEIHKWPLELFCCSDAVCVCQDCVTEDHRGHNTVPVLEARRTIERELRDKQT
EMVKTVAVAENAINQLQLNTVSFENSVTEVREVIDSQFMELQAAVERAKREVTEILEGEE
KQALRQTEGIKVHLEQKCTELKKTQEHLKKLSKNKNDVDFLQEYSKWKKDSPDITLPGVY
IGLMDRLNSFSRVIVTSTQELCEKLLSNYIETLKETCKNDKMGIKTTVHEIIAAKQNMTV
PDPKTRDDFLKYAALVSFDADTAHKFLRLTEENRKVTNTTPWQHPYPDVPERFENWRQVL
ATESFYVGRHYFEVDVSGEGTHVGLTYKSIDRKGPKNNSCITGYDFSWCLQWNGRSFSAW
HSDVETPLKVEKFTRIGVYVEFSCGLLAFYGVDDAVGMTLIHKYKADFLEPLYPAFWLSK
KENVIELVGPGESLTLKSPSPPNSPPNTDVAPPSRFTVSSVVDQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaaaacgagtcaaaatccaaaccagaccagaaactctgctgcactgtg
tgttccagtgctctcaataaggataagcccgctacctgtggccactcagtctgtgcctct
tgcttggggaagaaaggtaaaggctgtcctcagtgtctacagagctctggcaagcctgaa
actgcacctgtggaacagaatggaacgttgaatggaatggtggccgagtctccaccggtg
atcaaaaccaaagaaaaatatgaaaaggacatagaagcccaggattcaaagaccgcagag
gaaacaatgatacaggaagacctgaaggaagcagaggaccctaaaaaaacagaggaagag
aaaaggaaagagaaagagaagctgttgggactcgatgatgttgtgtgtgactcatgtatg
gagacgagcccgtgcatggccctaaagtcgtgccacacctgccttgtgtcctactgcgag
gcccacctcaggccccacctggagaaccccaagttccagaaccaccgtctggtggagccg
ctgagggacatcgagagacggacctgtgaaattcacaaatggcccctggagctgttctgc
tgttctgatgctgtgtgtgtctgtcaggactgtgtgacagaagaccacaggggacataac
actgttcctgtgttagaggcgcgcagaaccatagagagggaactacgagataaacaaaca
gagatggtgaagacagtggcggtagcagagaatgccatcaaccaactccaactcaacacg
gtttcctttgagaattcagtgacggaggtccgtgaggtgattgacagccagtttatggag
ctgcaggctgcggtggagcgggccaagagagaggtgacagagatcctggagggagaggag
aagcaggctctcagacagaccgaggggatcaaggtacacctggagcagaagtgcactgag
ctgaagaagacacaagagcatttgaaaaagctctcgaagaacaagaacgacgtggacttc
ctacaagaatactctaagtggaagaaggacagccctgacattaccctacctggggtctac
atcggcctcatggaccggctcaactccttcagcagagtgattgttacctccacacaggag
ctgtgtgagaagctgctgtccaattacatagagacactcaaagagacctgcaaaaatgac
aagatggggataaaaaccacagtccatgaaataatcgcagccaaacagaacatgactgtg
ccagacccaaagacgcgggatgacttcctaaagtatgctgcgcttgtgagttttgacgca
gacacggcccataagttcctgcgtctgactgaggagaacaggaaggtgaccaacaccaca
ccctggcaacacccgtaccccgatgtccctgagcgctttgagaactggcgccaggtactg
gccacagagagcttctatgtcggtcgacactacttcgaggtggacgtgagcggtgagggc
acgcatgtcggactcacctacaagagcatcgatcgcaagggcccaaagaacaacagctgc
attaccggctatgacttctcatggtgtctacaatggaatggccgcagcttctctgcctgg
cacagtgatgtggagacgcctctgaaagtggagaagttcacacgtattggggtctatgtg
gaattcagctgtggcctactggccttctatggggtggatgatgctgtcggcatgaccctc
attcacaaatacaaggctgactttctggagcccctctacccagccttctggctgtcgaag
aaggagaacgtgatagagcttgttggacctggggagtcgctgacactgaaaagcccctct
cctcctaactcacccccaaacaccgatgttgcaccccccagccgtttcacagtatcttct
gttgttgatcaatga
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