Salvelinus namaycush (lake trout): 120045990
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Entry
120045990 CDS
T07522
Name
(RefSeq) dynein intermediate chain 3, ciliary-like
KO
K11143
dynein axonemal intermediate chain 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120045990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120045990
04812 Cytoskeleton proteins [BR:
snh04812
]
120045990
Cilium and associated proteins [BR:
snh03037
]
Motile cilia and associated proteins
Dynein arm
120045990
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120045990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML
MIOS_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
MvcA_ins
Motif
Other DBs
NCBI-GeneID:
120045990
NCBI-ProteinID:
XP_038846837
UniProt:
A0A8U0QP47
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Position
Sna4:72514973..72524584
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AA seq
581 aa
AA seq
DB search
MEIVHVYTKKRNEFGRQCNFSDRPAELHVDILPDPSLASNFIERDPCDVPIQCTQEMSEH
EVNTERFESDTRGINHVEGGWPKDVNPQEMEQTIRFRKKVEKDEHYFSTIMQLGSNMEHC
IKQNNAINIYQEYFEEEEVVEESEEQPSAKTINVFRDPNEIKRTATCLSWHPDGSCKLAV
AYSSLGFQNISPDMSYDSYIWDIENPNKPEMTLKPVSLLVCLEYNPKDSHILVGGSYNGQ
IAYWDTRKGSQPVEMSTIEHSHRDPVYKVIWLQSKTGTDTFSASTDGQVLWWDIRKMSEP
TERLVLDPNKKGNLDNALGAISLEFETTMPTKFMVGTEQGLVVSCNRKAKTPAEKIVCTY
SGHHGPIYALQRNPFFPKNFLTVADWTARIWSEDIKESSIMWTKYHMAYLSDGCWSPVRP
SVFFTVKMDGTLDVWDFLFKQNDPTLSLKVCDEALYSLRVQDNGRFLACGSQLGTATLLE
ISPGLCTLQRNEKALATAMFERETKREKILEARHREMRLKERSRSEQSKDEDTKEGDGEE
SVEELATRTEAEFYEIVEAELKKRAKEQEKKEKDVCEEKEV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggagatagttcatgtgtacaccaagaagcgcaatgagtttgggcgacagtgtaatttc
tctgatcggcctgctgagttgcatgtggacatcctccctgatccttctctggcatccaac
ttcattgagagagacccttgcgatgttcccatacagtgcacacaagagatgtccgagcat
gaggtgaacacagagcgctttgagtcagacaccagggggataaaccatgtggagggaggc
tggcccaaggacgtcaaccctcaggagatggagcagaccatccgcttcaggaagaaagtg
gagaaagatgagcattatttcagcaccatcatgcagctgggcagtaatatggagcattgc
atcaaacaaaacaatgccatcaacatctaccaggagtactttgaagaggaggaggtggtg
gaggagtccgaggagcagccctcagccaaaaccatcaatgttttcagagacccgaacgag
ataaagcgcactgccacctgtctgtcctggcatcccgatggcagctgtaaactggctgtg
gcctactcttcactagggttccagaacatctccccagacatgagctatgactcatatata
tgggacattgagaatcccaataagccggagatgaccctgaaaccggtctctctactggtc
tgtctggagtacaaccccaaagactctcacatcctggtcggaggcagctacaatggccag
atcgcttattgggacactcgcaaggggagccagccggtggaaatgtccacaatagagcac
agccacagagaccctgtctacaaagtcatctggttgcagtcaaagacaggaaccgatacc
ttttctgcatctacggacggtcaggtgctgtggtgggacatccgtaagatgagtgagccc
acagagaggctggtactggaccccaacaaaaagggcaacctggacaatgccttgggggcg
atctcactggagtttgagaccactatgcccacaaagtttatggtggggacagagcaaggg
ctggtggtctcctgtaaccgcaaggccaagaccccggcagagaagatagtgtgtacgtac
agcggtcatcacggcccaatctacgccctgcaaaggaaccctttcttccccaagaacttc
ctgaccgtagccgattggacagcccgcatctggtccgaagacatcaaggagtcgtccatc
atgtggacaaaataccatatggcctatctgtcagatggctgctggagtccagtacggccc
tctgtgttcttcaccgtcaaaatggacgggacgctagacgtttgggacttcctcttcaaa
cagaacgaccccaccctcagtctaaaagtgtgtgatgaggctctgtacagcctgcgggtg
caggataacgggcgcttcctggcctgtggctctcagctgggcactgccaccctgctggaa
atctccccagggctgtgtaccctccagaggaacgagaaggccctagccactgcgatgttt
gagcgggagactaaacgggagaagatcttggaggcgcgccaccgtgagatgcgtctgaag
gagcgcagccgctcggagcagagcaaggacgaggacaccaaggagggcgacggagaagag
agcgtcgaggagctagcaactcgcacggaggcagagttctatgagatagtagaagctgag
ctgaagaagagagctaaggagcaagaaaaaaaggagaaagacgtgtgtgaagagaaagaa
gtctga
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