Salvelinus namaycush (lake trout): 120046080
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Entry
120046080 CDS
T07522
Name
(RefSeq) RPE-retinal G protein-coupled receptor-like
KO
K04254
retinal G protein coupled receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120046080
04030 G protein-coupled receptors [BR:
snh04030
]
120046080
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120046080
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Vision
Opsin
120046080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
DUF641
Motif
Other DBs
NCBI-GeneID:
120046080
NCBI-ProteinID:
XP_038846943
UniProt:
A0A8U0QNB3
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Position
Sna4:4094247..4100292
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AA seq
296 aa
AA seq
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MAAYTLPEGFSDFDMFAFGSALLVGGLLGFLLNAISILAYISVKQMRTPSNFLVFNLAVA
DIMLNITGLIAAYASLFYSHWPWGQDGCSNHAFMGMTAVLASISFLATIAWDRYHQYVTN
QKLFWSTAWTISIVTWGLAIFWAAVPLIGWGVYDFEPMRTCCTLDYTKGDKDYITYMGAL
TVFYLILPAYVMKSNYDAIHAYFKKIHKHRWNTSLPLMVLLFCWGPYEIMCIYACFGNAR
LVSPKLRMLLPVLAKTNPIFNAWLYSFGNEFYRGGVWQFLTGQKFTEPVVVKLKGR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatacacattaccggagggattctccgattttgacatgtttgcattcggttca
gctcttcttgttgggggtcttcttggattcctcctcaacgccatttcaatattggcctat
attagcgtaaagcaaatgcgaactcccagtaattttcttgtgtttaaccttgctgtggct
gacattatgctcaatataaccggcctgatcgctgcttacgccagcttattttatagtcac
tggccctggggccaagacggatgtagcaaccacgccttcatggggatgacagcagttctg
gcctctatcagcttcctggctaccatcgcctgggacagatatcaccaatatgtcaccaat
cagaagctgttttggagcacggcctggactatttctatcgttacctggggtttggctatc
ttctgggccgccgtccctctgattggttggggagtttatgactttgagcccatgaggacc
tgctgcactctagactacaccaaaggagacaaggactacattacctatatgggggccctg
actgtcttctaccttatcctccctgcttatgtcatgaagtccaactacgacgccattcac
gcatacttcaagaagatccacaagcacaggtggaacaccagtttaccactgatggttctg
ttgttctgctggggaccctacgaaatcatgtgtatctacgcctgctttggcaacgccaga
ctggtctcaccaaagctgagaatgttgcttcctgttttggcgaaaacgaaccctattttc
aacgcgtggctctattcctttgggaacgagttctacagaggaggggtgtggcagttcctg
actggccagaagtttactgagccggtcgttgtgaagttaaaaggaagataa
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