Salvelinus namaycush (lake trout): 120046090
Help
Entry
120046090 CDS
T07522
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3-like
KO
K22991
WD repeat-containing protein 45
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120046090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046090
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120046090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
BCAS3_WD40
ANAPC4_WD40
WD40_Prp19
Beta-prop_IFT122_2nd
WD40
Beta-prop_HPS5
WDR55
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_VPS8
DUF5711
Beta-prop_DCAF12
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
120046090
NCBI-ProteinID:
XP_038846964
UniProt:
A0A8U0QS39
LinkDB
All DBs
Position
Sna4:complement(6366506..6380717)
Genome browser
AA seq
344 aa
AA seq
DB search
MNLLPSNAHGNGLLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFMEGGVSHVEML
FRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVD
IPAHEGVLCCIALNLQGTRIATASEKGTLIRIFDTMAGHLIQELRRGSQAANIYCINFNQ
DASLICLSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSNSPCVCA
FGTEPNSVIAICADGSYYKFLFNPKGECSRDVYAQFLEMTDEKI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactaccatcaaatgcacatgggaacggactcttgtacgcgggattcaaccag
gatcatggatgctttgcttgcggaatggagaatgggtttagggtgtacaacgcagaccca
ctcaaagagaaagaaaaacaagagttcatggagggcggggtcagccatgtggagatgctg
ttcaggtgtaactacctagcgctggtcggtggagggaagaagcccaaatacccacctaac
aaagtgatgatctgggatgacctgaagaaaaagacggttatagaaattgagttctccacg
gaggtgaaagcagtgaagcttcgaagggacaggatcgttgtggtcctggactcaatgatc
aaagtgttcacgttcacccacaaccctcatcagctgcatgtgtttgagacctgctataac
ccaaaaggtctgtgtgtactgtgtcccaacagtaacaactctctcctggcgttcccgggc
acccactctgggcatgtgcagatcgtggacctagccaacacagagaagcctccggtggac
atccccgcccatgagggggtgctgtgctgcatcgccctcaacctgcagggaaccaggata
gccaccgcctccgagaaagggaccctgatcagaatatttgacaccatggcaggtcacctg
attcaggagttgaggcgggggtcacaggccgctaacatctactgcatcaacttcaaccag
gacgcgtccctcatctgtctgtctagtgaccatggtacagtccacatattcgctgcagag
gaccccaagaggaacaaacagtccagcttagcctcggccagtttccttcctaagtacttc
agctccaagtggagcttctccaagttccaggttccatcaaattcgccgtgtgtgtgtgcc
tttggaacagaacccaactctgtcatagccatttgtgctgacggcagctactacaagttc
ctgttcaacccgaagggggagtgttcccgagacgtctacgcccagttcctggagatgact
gatgagaagatctga
DBGET
integrated database retrieval system
