Salvelinus namaycush (lake trout): 120046122
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Entry
120046122 CDS
T07522
Name
(RefSeq) metastasis-associated protein MTA3-like
KO
K11660
metastasis-associated protein MTA
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120046122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120046122
03036 Chromosome and associated proteins [BR:
snh03036
]
120046122
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120046122
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
120046122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
MTA_R1
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120046122
NCBI-ProteinID:
XP_038847026
UniProt:
A0A8U0QQW1
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Position
Sna4:complement(9462263..9486735)
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AA seq
515 aa
AA seq
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MAANMYRVGDYVFIENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISHSLIQLAD
KHAQDLEEEKESPSEADLTDKQEHQLRHRELFLSRQYESLPATHIRGKCSVALLNETEAV
LSYLDKEDMFFYSLVYDPTQKTLLADKGEIRVGPRFQADVPDILQEGDSDERDQSKLEEK
LWDPDCPLSSKQIDQFLVVARAVGTFARALDCSSSVRQPSLHASAAAASRDITLFHAMDT
LHRHGYDLSSALSVLVPSGGPVLCRDEMEEWSASEAAMFEEALEKYGKDFNDIRQDFLPW
KSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYNKPNPNQISVTNGKMATV
NGAGPGAYHAAGGGRACESCYSTQSAQWYSWGPPNMQCRLCVSCWMYWKKYGGLKMPSRA
EGPEEKTPPSPVPNEPRSRGHGPRQSSHMVPVRNSGSPKSSTKTKQAFLLQATRLTKLAR
HMCRDIIRLRRAARRPFVPINCGAIKAACKSSFNS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacatgtaccgggtcggagactatgtattcattgagaattcctccagcaac
ccttacctgattcgccggatagaagaacttaacaagacagccagtggcaatgtggaggcc
aaggtggtgtgtttctacagaaggagagatatctcacacagcctcatacagttggctgac
aaacacgcacaggacctagaggaggagaaagagagtccgtctgaggcggacctgacagac
aaacaggaacaccagttacgtcacagagaactgttcctctcgcgccaatatgagagtcta
ccagccacacacatcagggggaagtgtagtgtggcattgttgaatgagacggaagctgtt
ctctcctacctggacaaagaggatatgtttttctactcgctggtctacgaccctacccag
aagacactgttggctgataaaggagagatcagagtgggaccacgctttcaggccgacgta
cctgacatactacaggagggtgactcagatgaacgtgaccaatcaaagctagaggagaag
ctatgggatcctgactgtcctctctccagcaaacagatagaccagttcctggtggtggca
cgggcggtggggacgtttgccagggcgctggactgtagcagctcagtcagacagcccagt
ctacatgcgagtgcagccgccgcctcacgagacatcacactgttccacgcgatggacacg
ctgcatcgtcatggttacgacctgtccagtgcgttgagtgtgttggtgccgtccggtggg
ccggtgctgtgtcgggacgagatggaggagtggagcgcctcggaggcagccatgtttgaa
gaggctctggaaaaatacggaaaggacttcaacgacataagacaagacttcctaccgtgg
aagtctctgaccagtataatagagtattattacatgtggaagacaacagaccgatacgta
cagcagaagagactgaaggcagcagaagcagaaagcaaactgaagcaggtttacatcccc
acatacaataagcccaaccctaaccagatctcagtgaccaatgggaagatggcgacggtg
aatggggctgggcctggagcctaccatgcagcagggggaggacgagcctgcgagagctgc
tactcgacgcaatcagcccagtggtactcgtgggggccacccaacatgcagtgtcgcctg
tgtgtgtcgtgctggatgtactggaagaagtacggtggccttaagatgccaagcagagcg
gaggggcccgaggagaagaccccacccagccctgtgcccaacgagcctcggtcgcgtggc
cacggcccccgccagtccagtcacatggtgccggtgcgtaacagcggcagccccaagtcc
tccacgaagacaaagcaggccttcctgctgcaggcaacccgcctcaccaagctggcacgc
cacatgtgccgcgacatcatcagactgcgacgcgctgcgcggcgcccctttgtgcccatt
aactgtggcgccataaaggctgcgtgtaagagctccttcaattcctaa
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