Salvelinus namaycush (lake trout): 120046125
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Entry
120046125 CDS
T07522
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120046125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046125
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
120046125
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
120046125
NCBI-ProteinID:
XP_038847034
UniProt:
A0A8U0UCF3
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Position
1:complement(56829334..56848604)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIISQEQVDAILTLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEILDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPEAEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggacgagcaggaaaagctacttgatgaagccgtg
caggctgtcaaggttcagtcatttcagatgaagcgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggcgaactcaggacctccatgttatcgcca
aagagctactatgaactctacatggccatctctgacgagctccactacctggaggtgtac
ctgacagatgagtttgccaaaggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccctagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcacgtaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctgttcctcagaaactacctgctgcagtgcacccgcaacatc
ttgcctgacgacggggagcagctagagggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgttgctgaattttgctgagatgaataagctgtgggtgcgcatgcag
caccagggccacagtcgagacagggagaagagggagaaggagaggcaggagctgcggatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggagaagtat
aaacagattgtgctgtccggtgtcctagaacaggtggtaaactgcagagattccctggct
caagaatatctcatggagtgcatcattcaggtcttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgtcaaaaacatc
atcatcgctctcattgacagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccaacaagtagccacagttatacagtcc
cgccaggacatgccttcggaggatgtggtctcactacaggtgtccctcatcaacctggcc
atgaagtgctaccctgaccgggtggactatgtggacaaggtgttggagagcacagtggag
atcttcaacaagctcaacctggagcacattgcaaccagtagcgcggtctcgaaagagttg
actaggctgctgaagatcccagtggacacctacaacaacattctgactgttctgcagctc
aagcacttccctccactcttcgagtactttgattatgagtcccgcaaaagcatgagctgt
tacgttctgagcaacactctggactacaacaccaccattatatcccaggagcaggtggat
gccatcctgaccctggtgtcgacactgatccaggaccagccagaccagcccgctgaagac
ccagacccagaggactttgctgaggagcagagccttgtgggtcgcttcattcatctgctg
ctttccgatgaccccgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgctggtgtttgctgcctatcag
ctggccttccgctacaaagagaactcttcatcagatgataaatgggagaagaagtgccag
aagattttctcgtttgcccaccaaaccatcagtgctctgatcaaggctgagctggctgag
ctgcccctcagactcttcctacagggggcgctggccgcaggagagattggcttcgagaac
cacgagactgtggcctacgagtttatgtcacaggccttctccctatatgaggatgagatc
agcgactccaaggctcagctagcagccatcacgctaatcatcggcacgtttgagagaaca
aaatgcttcagcgaggagaaccacgagcctctgaggacgcagtgtgcgctcgctgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcttgacgggaagagggtgatggag
tgcttaaagaaggccctgaaaatcgccaaccagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaacagatacgtctgtttctacgaaagagagaatgatgcggtg
acggtccaggttctgaaccagctgatccagaagatccgagaggacctgccaaacctggag
gccagcgaggagacggagcagattaacaaacacttccacaacacactggagcacctgcgt
ctgcagagagagtcgccggaggccgaggggcctgcttatgagggcctggtgctgtag
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