Salvelinus namaycush (lake trout): 120046234
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Entry
120046234 CDS
T07522
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120046234 (top2a)
03036 Chromosome and associated proteins [BR:
snh03036
]
120046234 (top2a)
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120046234 (top2a)
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Topoisomerases
120046234 (top2a)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
120046234 (top2a)
Centrosome formation proteins
Centriole proteins
120046234 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
120046234
NCBI-ProteinID:
XP_038847224
UniProt:
A0A8U0UB92
LinkDB
All DBs
Position
Sna4:complement(16779805..16805562)
Genome browser
AA seq
1560 aa
AA seq
DB search
MSEPLKSLFENKAVEKTKKNPNRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQLWVF
DEDVGMNCRDVTFVPGLYKIFDEILVNAADNKQRDKTMSCIKINIDAENNSISVWNNGKG
IPVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSNKFTVETACK
ESKKTFKQTWYDNMGRAGEHKIRSFDGDEFTCITFQPDLSKFKMQTLDKDTVAIMTRRAY
DIAGATKGVRVFLNGKRLPVTSFRNYVDLYLKDKVDELGIPLVVVHEVVSERWEVCLTMS
EKGFQQVSFVNSIATTKGGRHADYVADQVTSKLIEVVKKKNKAGVAVKPFQVKNHMWIFV
NCLIENPTFDSQTKENMTLQQKSFGSTCPLSDKFIKQANSCGIVESIMNWVKFKAQTQLN
KKCSAVKHNKIKGVPKLDDANDAGGKNSNGCTLILTEGDSAKTLAVSGLGVVGRDRYGVF
PLRGKMLNVREASHKQIMDNAEINNVIKILGLQYKKNYSDPESLKSLRYGKLMIMTDQDL
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKASNKKQELSFYSIPEFNEWKEVQPN
IKSWKIKYYKGLGTSTSKEAKEYFSDMQRHRIPFKYAGPVDDEAITLAFSKKKIEERKEW
LTSYMVNRRQRREHNLPEEYLYGQATKSLSYNDFVNKELVMFSNSDNERSLPCLVDGLKP
GQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEISLMMTIVGLAQNFVGSNNLNLL
QPQGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAVDDNLLKYNYDDNQRVEPEWYIPI
IPTVLVNGADGIGTGWASRIPNFDVREVVNNIHRMLNGEEPLPLLPGYKGFKGTIDQLMT
NQYMNSGEVAIIDSTTIEITELPVKTWTQTYKENVLEPMLNGTEKVQALITDYKEYHTDT
TVRFVVKMTEERLREAEAAGLHKVFKLQQPLTCNSMVLFDHVGSLKKYELVQDVLKDFFE
LRMKYYVLRKDWLAGMLGAESAKLTNQARFILEKIEGTLIIENKPKKQLILMLTEMGYDS
DPVKAWKDAQEKDKTVEETDDDEDKEEDVTGPDYNYLLNMPMWYLTKEKKEELCKQRDTK
ITELNTVKKKSPADLWKEDLAAFTEELERVEEKERQNATMPVVKGKAGKGKVGKVKQETM
PTPQGRRVIPRITSTMKAEATKKAVVKKGKKGEELVMKMEFEDGEENGEPAAAEEIGLAA
RLTKTRKAPAKDKVSKALGKQTTLSFKPMAAKKNPWSDDSGSDSELAISLDVGPVVPKEK
AERKAKAAVKYNLYSSSEDEFDCGLSSPKKAASVDDGCFVPEANSAIDSEADSPPPKAPE
PKKMVKSNSATVSEAKSKSSSQSDGDDAMASMPPAKPKAAPKKTAAPKKMAIAKKKPADA
KQPSIMDALSKPKSVSKTAAKKIPSFDSSSSEGSSNAPAPSKAAPAKRKALDSDDSDRSS
DDLMSRIKGKKTTVASKKTKVWNDESFHISDEEVVAPRSKAVRAKKPVAYNFDSDSDEDF
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccattgaagagcttgtttgagaacaaggctgtggagaagaccaagaagaac
cctaaccgcctgtcagtggaaaggatctaccagaaaaagactcagctggagcacattctg
ctacgtccagacacctacattggctctgtggagcctgtcacacagcaattgtgggtgttt
gatgaggatgttggaatgaactgtcgagatgtgacctttgtaccaggtctctacaagatc
tttgacgaaatccttgtgaatgctgccgataacaagcaaagggataaaaccatgtcctgc
attaaaataaacattgacgctgagaacaactccatcagtgtgtggaacaatgggaagggc
atccctgtggtggagcacaaggtggagaaggtctatgtgccagctctcatcttcggacag
ctcctcacctctagtaactatgacgacgaccagaagaaggtcaccggtggacgcaacggc
tatggtgccaagctttgcaacatcttcagcaacaagttcaccgtggagacggcctgcaag
gagtccaagaagaccttcaagcagacgtggtatgacaacatggggcgggctggggagcac
aagatcaggtcgtttgacggcgacgagttcacgtgcattaccttccagccggacctgtcc
aagttcaagatgcagaccctggacaaggacacggtggccatcatgacccgacgggcttac
gatatcgccggtgccaccaagggagtccgtgtgttcctcaatggcaagaggctacccgtg
acgagtttccgtaactacgtggacctgtacctgaaggacaaggtggatgagctgggcata
cccctcgttgtggtccatgaggtggtgagcgagcggtgggaggtgtgcctcacaatgagc
gagaagggcttccagcaagtcagctttgtcaacagcatcgccaccaccaagggtgggaga
catgctgactacgtggcagaccaggtgacatccaagctcattgaagttgtcaagaagaag
aacaaggctggcgtggccgtcaagcctttccaggtgaagaaccacatgtggatttttgtc
aactgcctgatcgagaaccctaccttcgactcccagaccaaggagaacatgaccctgcag
cagaagagcttcggttccacctgccccctcagtgacaagtttatcaaacaggccaactcc
tgtgggatagtggagagcatcatgaactgggtgaagttcaaggcccagacgcagctcaac
aagaagtgctctgccgtcaagcacaacaagatcaagggagtgccaaaactggacgacgcc
aacgacgcaggtggtaagaactccaacggctgcactctgatcctgacggagggagactcg
gccaagacgctggccgtgtctggtctgggcgtggtgggcagagaccgctacggagtcttc
cctctcaggggaaaaatgctcaacgtgcgggaagcctcgcacaagcagatcatggataat
gctgagatcaacaacgtcatcaagatcctggggctgcagtacaagaagaactacagcgac
ccagaatccctcaagtccctgcgttacggcaaactcatgatcatgaccgatcaggacctg
gacggctcccacatcaaggggttgcttatcaacttcatccaccacaactggccctcactg
ctgcgccacaacttcctggaggagttcatcacccccatcatcaaggcctctaacaagaag
caggagctgtccttctacagcatcccagagttcaacgagtggaaggaagtgcagcccaac
atcaaatcttggaaaataaaatactacaaaggtttgggtaccagcacttcaaaggaagcg
aaggagtacttctctgacatgcagagacatcgcattcccttcaagtacgctggacctgtc
gacgacgaggcaattaccctggcctttagcaagaaaaagattgaggaacgtaaagagtgg
ctgaccagctatatggtcaacagacgccagcgcagggagcacaacctgcctgaggagtac
ctgtatggtcaagccaccaagtccctgtcctacaacgattttgtcaacaaggagcttgtg
atgttctctaactcagacaacgagaggtccctcccctgcctggtcgatggtctgaagccg
ggccagaggaaggtgctgttctgctgcttcaagaggaatgacaagcgggaggtgaaggtg
gctcagctggctggttccgtggcagagatgtcagcctatcaccatggagagatctctctc
atgatgaccatagttggcttggcccagaactttgtgggcagcaacaacttgaacctgctg
cagcctcagggtcagtttggcacgcggctgcacggtggcaaggactctgccagcccccgt
tacatcttcaccatgctcagccccctggcccgtctactcttccccgcggtggatgacaac
ctgctgaagtacaactatgacgacaaccaacgcgtggagcccgagtggtacatccccatt
atccccaccgtgctagtgaacggcgccgacggcatcggcacgggctgggccagccgcatc
cccaacttcgacgtccgcgaggtcgtcaataacatccaccgcatgctgaacggggaggag
ccgctgcctttgctccctggctacaagggcttcaaaggcaccattgaccagctgatgacc
aatcagtacatgaacagtggagaggtggccatcatcgacagcaccaccatcgagatcact
gagctgcccgtcaagacatggacacagacctacaaggagaacgtgctggagcccatgctg
aatggcacagagaaggtccaggccctcatcaccgactacaaggagtaccacacggacacc
acggtgcgcttcgtggtcaaaatgaccgaggagaggctgagggaggccgaggcggctggc
ctgcacaaggtcttcaagctgcagcagcccctcacttgcaactcaatggtgctgtttgac
catgtgggcagcctgaagaagtatgagttggtgcaagatgtgctgaaggatttctttgag
ttaaggatgaagtactacgttctgagaaaggactggctggccggcatgctgggggcagag
agtgccaagctcaccaaccaggcccggttcatcttggagaagattgagggaaccctgatc
atcgagaacaagccaaagaaacagctgatcctcatgctgacggaaatgggctacgactct
gaccccgtcaaggcctggaaagatgctcaggagaaggacaagactgtggaggaaacggat
gatgatgaggacaaagaggaagatgtcactgggccagactacaactacctgttaaacatg
ccgatgtggtacctcaccaaggagaagaaagaggagctgtgcaaacagagggataccaag
attaccgaactgaacaccgtgaagaagaagagcccagctgatctctggaaggaggacctc
gctgccttcactgaggagctggagcgtgtggaggagaaggaacggcaaaacgccaccatg
cctgtggtgaagggcaaggctggcaagggcaaggtggggaaggtgaagcaggagaccatg
cccacgccccaggggcgccgcgtcatcccacgcattaccagcaccatgaaggctgaggcc
accaagaaggccgttgtcaagaaaggcaaaaagggtgaggaattggtgatgaagatggag
tttgaggatggagaagagaacggagagccggctgctgctgaggagattggcctggcagcg
cgactgaccaagacacgcaaagcaccagccaaggacaaagtatcaaaggcattgggtaaa
cagaccaccctgtcgttcaagcccatggcggccaagaagaacccgtggtctgacgattct
ggctcagacagtgagttggcgatttcactggatgttggcccagtggtacccaaggagaaa
gctgaacgcaaagccaaagctgctgtgaagtacaatctgtacagcagcagtgaggatgag
ttcgactgtgggctgagctcccccaagaaggcagcgtccgttgatgacggctgctttgtc
cccgaggccaactctgcgatcgatagcgaggcagactctccaccacctaaggctcctgag
cccaaaaagatggtgaaaagcaattcagcgactgtaagtgaagctaaaagcaaatccagc
tctcagtctgatggcgatgatgcgatggcctctatgcctccagccaaacccaaggcagcc
cccaagaaaacagcagctcccaagaaaatggcaatcgccaagaagaagcctgcagatgcg
aagcagccgtccatcatggatgctctgtccaagcccaagtcagtctccaaaaccgccgcc
aagaagatcccgtcgtttgactccagcagctcggagggctcgtccaatgcccctgcccca
tctaaggccgctccggccaagcgcaaggccctggacagtgacgactcggacagaagctct
gatgacctcatgtcccgcatcaagggcaagaagactaccgtcgccagcaagaaaacaaaa
gtatggaatgatgagagcttccatatatcagatgaggaggttgtggctcccaggagcaaa
gcagtccgtgccaagaaacctgtcgcttacaactttgactcggactctgatgaggacttt
tag
DBGET
integrated database retrieval system
