Salvelinus namaycush (lake trout): 120046242
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Entry
120046242 CDS
T07522
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120046242 (rnf40)
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120046242 (rnf40)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
120046242 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
BRE1
CC_Bre1
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Ice_binding
Motif
Other DBs
NCBI-GeneID:
120046242
NCBI-ProteinID:
XP_038847235
UniProt:
A0A8U0UC51
LinkDB
All DBs
Position
Sna4:complement(17375415..17389203)
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AA seq
976 aa
AA seq
DB search
MSGTGGGKRASGGDSSPGPPEKKCKKEEKTTTTLIEPIRIGGVSSTEEMDMKVIQFKNKK
LSERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVHVLRQRIDPTVVP
APPATPVSAPTPMDADGMMIPPPPPSAPLPAPEHEEQQPPPPDGMEIAREPQQDSTIAPP
PTTTLSESTKAFLSTLDNSSEEELSLQLRDRMQFSKEAAACMVCVFDRLHSRIDGLCTQI
LSAACEDDSQEEMLRLNRTLLEENGRLQDLASSLQGRHHKMSMEYNELVDKVTSSETKVS
EMETAVEDLQWDIEKLRKREQKLNKHLAEALEQLTSGYYTTGSSGGLPGGQITLNIQKFE
SLNAELEQNQELANNRMADLEKLQQELQEAVRESEKLKLDLKNIPEDVVKETVDYKCLQS
QFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTLA
QVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLRETQM
EINKLRCQSGDTGLLSLEEPVSDSLEVKKEEDEDQEEEEERRRELERQRARERERETERE
RERERERERERERQRSEELKRKDSDTLKMLRAELKKAQESQKEMKLLLDMYKSAPKEQRD
KVQLMAAERKSKAEVDELRVRVRELEERERKESKKLADEDALRKIRVAEETIDHLQKKLT
ATKQEEEALLSEMDVTGQAFEDMQEQNSRLMQQLREKDDANFKLMSERIKSNQIYKLLRE
EKEELADQVLTFKTQVEAQLLVVQKLEEKEGILQSSLTNLEKELGVRIQALELNKRKAVE
AAQLAEDLKVQLDHTQSKLREIQVSVSENRNARERELGNLKRAQEDLSRLRRKLEKQKKV
EVYTDADEILQEEINQYKAKLRCPCCNTRDKETVLTKCFHVFCYECLKTRYDTRQRKCPK
CNCAFGANDFHRIYIT
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaccgggggagggaagcgagcctcaggtggggacagctcccctggtccacct
gagaagaagtgtaaaaaagaggagaagaccaccaccactctcattgagcccatacgcatt
gggggagtgtcctctacggaggagatggacatgaaggtgatccagtttaagaacaaaaag
ctgagtgagcgtctggagcagaggcagaccatggaggatgagctgcgggagaagatcgag
aagctggaaaagcgacaagctactgacgataccacactgctcattgtgaatcgctactgg
tcccagttggaagaaaatgttcacgtcctgcgccaacgcattgaccccacggtggtcccg
gcaccgcccgctactcctgtttctgcccctaccccaatggacgcggatggcatgatgatc
ccaccaccccctccttcagccccactcccagcgccagaacacgaggagcaacagcctcca
ccacccgacggtatggagatagctcgtgaaccacagcaggactcgacaatcgccccgccg
cccactactaccctcagtgagagtaccaaagccttcctctccactttggacaacagcagt
gaggaggagctcagcctgcagttgcgggacaggatgcagttcagcaaggaggccgctgcc
tgcatggtctgcgtcttcgacaggctccacagccgcatcgacggcctatgcacccagatc
ctgtccgcagcgtgtgaggatgatagccaggaagagatgctccgtctgaatcgtactctg
ctcgaggagaatggcagactgcaagacctggcctcctccctgcagggcagacaccacaag
atgtctatggagtacaacgagcttgtggataaggtgacaagctcggagaccaaggtgtct
gagatggagactgctgtggaggatctgcagtgggacatcgagaagctccgtaagagggaa
cagaagctcaacaagcatctggctgaggcattggagcagttgacctcgggctactacacc
actggaagctcaggggggctacccggtggccagatcaccctcaatatacagaagtttgag
agcctgaatgcagagttggagcagaaccaggagctggccaacaaccgcatggcagacctg
gagaaactacagcaggagctccaggaggctgtcagggagagcgagaaactcaagttggac
ctgaaaaatattccagaggatgtggtgaaggagaccgtggactacaagtgcctgcagtcc
cagttctccctgctctacaatgagtctttgggggtgaagacccagctggatgaggcccgg
gccctgctcctcaccgcaaagaacgcccacctcagacagatagagcacatggagagtgac
gagctgtccctacagaagaagctccgcacagaggtcatccagctggaagacacgctggcc
caggtgcgcaaggagtacgagatgctgcgcatcgagtttgagcagaacctggcggccaac
gagcaagcaggcccaatcaacagagagatgcgccacctcatcagcagcctccagaaccac
aaccaccagctgaaaggtgacgtgcagcgttacaagcggaagctccgagaaacacagatg
gagatcaacaagttgcggtgtcagagtggtgacaccgggcttctgtcattggaggagccg
gtgagcgacagcctggaggtgaagaaagaggaggatgaagaccaagaggaggaggaggag
aggaggagggagctggagagacagcgggcccgggagagagagagggagactgagagggaa
cgagagagggaacgagagagggagcgagaaagagagcgacagcgcagcgaggagttgaag
aggaaagattcggacaccctgaagatgctgagggcggaacttaagaaagcccaggagtct
cagaaggagatgaaactacttttggacatgtacaaatcagctcccaaagagcagagggac
aaagtgcagcttatggcagcagagcgcaagtctaaagccgaggtggatgagttgcgggtg
cgtgttcgagagctggaggagcgggagaggaaggagagcaagaagctggctgatgaggac
gctctcaggaagatccgtgtggcagaggagacaatcgaccacctacagaagaagctcacg
gccaccaaacaggaggaggaggccctactgagtgagatggacgtgacgggccaggccttt
gaggacatgcaggagcagaacagccggctgatgcagcagctgagggagaaggacgacgcc
aacttcaagctgatgtcggaacgcatcaagtccaaccagatctacaagctgctgagggag
gagaaggaggagctggctgaccaggtgctcacctttaagacccaggtggaagcccagtta
ttggttgtacagaagctggaggagaaagagggcatcctccagagctcactgaccaatctg
gagaaagagttaggagttcgcatacaagcactagaactcaacaagaggaaggcagtggag
gcagcccagctggctgaggaccttaaggtgcagctggatcacacccagtccaagctgagg
gagatccaggtatctgtgtctgagaaccgcaacgccagagagagggagttgggaaacctc
aaaagagcgcaggaggacctgtccaggctacgacgaaagctggagaaacagaagaaagtg
gaggtgtacactgatgctgatgagatcctgcaggaggagatcaaccagtacaaggcgaag
ctgcgttgtccgtgctgcaacacccgcgacaaggagacggtgctcaccaagtgtttccac
gttttctgctacgagtgtctgaagacgcgctacgacacccgacaaaggaagtgccccaag
tgcaactgtgccttcggggccaacgacttccaccgcatctacatcacctaa
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