Salvelinus namaycush (lake trout): 120046263
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Entry
120046263 CDS
T07522
Name
(RefSeq) rab11 family-interacting protein 3-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120046263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046263
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120046263
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
2-thiour_desulf
EF-hand_9
ZapB
Motif
Other DBs
NCBI-GeneID:
120046263
NCBI-ProteinID:
XP_038847271
UniProt:
A0A8U0QMT8
LinkDB
All DBs
Position
Sna4:18023521..18068733
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AA seq
1075 aa
AA seq
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MEQTLMSSPLGHSEWDPEGTSSHGFILLDSDKGAIMPQRKGGQTALDFQKVDQDVSLCLE
ELFQENALNLDSLFRTSSYSGGDKILPWEGDQSNHSQDVPLDKPSELSPLKDKIEEHNNV
SDSPLPWLLFSKTTDLLRDNSVCEELNSLQDPPVSYTDSVNSHKELITLSEPPSPVKVSD
RTPDTNTEASSLLVDHLSSEHFPFSPSPAPSSEVNPQGVSKELLLLSLDEDSGFPPPLQG
GETVSPETGDKGLFLEPVTDLPTVSNSTPEGLPESSFSHDAIPTDCASESPGVQVGSVPL
LDLEVPDCDSSLSLCPTPLESPTCTGASPAEDSEQEHTLATSILTISEHRGEGDSSLLLN
SSPSIEPPSPKFLSNRDASVLGHLPSGCSSEENGPQYLMEDKIIFDLTKHEGEEEMALDQ
CLTSDVLPDEETWDLKPPEAIQGDSVPALQTELHDGERLADLDLFAGTTGCHKRECFDCP
VLELNGLSSDSGWTSEQTVETLSLSKMVGSDSMVPIVNRREEDPSPLKAVFDALDQDGDG
FVRIEEFMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGTEPQLYDVHF
SPGDGAVGCSEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVQPEMHEDVETDSGI
EATLHDPEDSSNRFSLSSELHSHTLVTVIGGDEEHFEDFGESNTSELLLDTTEEGTEGEG
DSSHLQTPNQSNCSSLLLSPSSSKRLSSKKVARHLLQNSSMTLDSMSELSRDILDLADTD
ITDKVLLLERRVAELEKDSEASGEQHARLRQENLQLVHRANALEEQLKEQELRAEDHLHQ
ETRRHKDALTKLERERGLELENLQARLQQLDEENSELKSCVPCYRANIERLEEEKRKLED
EVEDVTERLNEELETRRKTTDKLTHERHQNQKEKEHTQELIEDLRKQLEHLQLYKLEAEA
RRGRSPSAGLQEYQSRTREAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVT
ASFSESLAAEINSVSRGELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSMLEVK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactctgatgtctagccctctggggcattctgagtgggatccagaaggcaca
agctcccatggattcatcctcttggattcagataaaggagccataatgcctcagagaaaa
ggtggtcagacagctttggatttccagaaggttgaccaggatgtatctctatgcctggaa
gagcttttccaggagaacgccttaaatttagacagtcttttcaggacctccagttactct
ggtggagacaagattttgccatgggagggagatcaatctaatcattcccaagatgttccc
ctggacaaaccttcagagttatcgcctctcaaagacaaaattgaggaacacaacaatgta
agtgacagtcctctaccctggctgttattctccaaaaccactgatttgctcagggacaac
tcggtgtgcgaggaactaaattccctgcaagatccacctgtgagttacacagactctgtt
aacagtcacaaggagctgataaccctcagtgaacctccttcccctgtgaaggtttcagat
aggactccagataccaacacagaggcttcctctttgttggtagatcacctctcatctgaa
cacttccccttctcccccagccctgccccttcaagtgaggtgaacccacagggtgtcagt
aaggagcttttactcctgtcactggatgaggacagtggcttccctcctcccttacagggc
ggggagactgtgtcacctgaaaccggggacaaaggtttattcctggaacctgtgactgat
ctacccacagtcagtaacagtacccctgaaggtttacctgagagcagcttctcacacgac
gccatacctactgactgcgctagcgaatcgccaggggttcaggtgggatctgtgcctttg
ctggatctggaggttcctgactgtgacagcagcctcagcctctgccctactcctcttgag
tcacctacctgcacgggtgcatcacctgcagaggattcagagcaggaacacacgttggct
acttcaatcctgactatatcagagcacagaggtgagggggactcgtccctccttctgaac
tcttcaccatcgattgaacccccgtcgccaaagttcctttccaacagagatgcttcggtc
cttggtcacctgcccagtggctgcagctccgaggagaatggcccccaatatttgatggaa
gacaaaattatttttgatttgaccaaacatgagggagaggaggaaatggctctggatcag
tgcttgacctcagacgtgctgcccgatgaggaaacgtgggacttgaaaccacctgaggct
atacagggtgacagtgttcctgccttacaaactgaactgcacgatggggaaaggttggca
gacttggacctgtttgccggaaccacaggttgtcacaaacgtgaatgttttgattgccca
gttctggagttgaatggtttgtcttctgactctggatggactagtgaacaaacagtagag
acgctgtcactctctaagatggtggggtctgactccatggtccccatagtgaatcggaga
gaggaagacccgtcacctctgaaggcagtgtttgacgctctggaccaggatggggatgga
tttgtacgcattgaggagtttatggagtttgctgctgcctatggggctgaccaggtgaag
gatctgaccaagttcctggacccaagtgggctgggggtgatcagcttcgaggacttccat
cgaggaatctcggccatcagcaatggagggacagagccccagctctacgatgtgcacttc
agcccaggggacggagccgtgggctgctcagaggagtacgatgagcaaaacgaggtgacg
gacagtgcatacctgggctcggagagcacttacagcgagtgtgagacgttcaccgacgag
gacacaggagccctggtccagcccgagatgcacgaggatgtggagacggacagcggcatc
gaggccacgctccacgaccctgaggacagcagcaacaggttctccctaagctctgagttg
cacagccacaccctcgtgacagtgattggcggggatgaggaacattttgaggactttggg
gagagcaacacctcggagctgctgctggacaccaccgaggagggaactgagggagagggg
gactcatcccacctccagacccccaaccagagcaactgctcctccctgctactctctccc
agctccagcaagaggctgtccagcaagaaagtagcacgacacctcctccagaacagctcc
atgacgctggacagcatgagtgagctgtcccgggacatactggacctggctgacaccgac
atcactgacaaggtgctcctactggagcgtcgcgtggcggagctggagaaggactcggag
gctagcggggagcagcacgcgcgccttcgccaggagaacctgcagctggtgcaccgggcc
aacgccctggaggagcagctcaaggagcaagagctccgcgccgaggaccacctgcaccag
gagacccgccgccacaaggacgccctcaccaagctggagcgggagaggggcctggagctg
gagaacctgcaggctaggctgcagcagctggatgaggagaacagtgagctgaaatcctgt
gtgccctgttaccgcgccaacatcgagagactagaggaggagaagaggaagctggaagac
gaggtggaggacgtgacggagcggctgaacgaggagctggaaacccggaggaagactacc
gacaagctgacccacgagcgccaccagaaccagaaggaaaaggagcacacgcaggagctg
attgaggacctgcggaagcagttggagcacctgcagttgtacaagctggaggcagaggct
aggagaggacgctctcccagtgccgggctgcaggagtaccagagccgcacccgcgaggcc
gagttggagcaggagatccgacgcctcaagcaggacaaccgcagtctgaaggagcagaac
gatgagctgaacggccagattatcaacctgagcatccagggagccaagaacctggtgacg
gcctccttctccgagtcgctggctgccgagatcaactctgtgtcccggggagagttgatg
gaggccatccgcaagcaggaggacgtcaacttccgactacaggactacatcgaccgcatc
atcgtggccatcatggagtccaacccctccatgctggaagtcaagtag
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