Salvelinus namaycush (lake trout): 120046295
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Entry
120046295 CDS
T07522
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03266
Virion - Herpesvirus
snh04081
Hormone signaling
snh04145
Phagosome
snh04148
Efferocytosis
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120046295
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120046295
04512 ECM-receptor interaction
120046295
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120046295
04148 Efferocytosis
120046295
09144 Cellular community - eukaryotes
04510 Focal adhesion
120046295
09142 Cell motility
04820 Cytoskeleton in muscle cells
120046295
04810 Regulation of actin cytoskeleton
120046295
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120046295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046295
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120046295
04515 Cell adhesion molecules [BR:
snh04515
]
120046295
04090 CD molecules [BR:
snh04090
]
120046295
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
120046295
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120046295
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin beta subunits
120046295
CD molecules [BR:
snh04090
]
Proteins
120046295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
EGF_Teneurin
BNR_6
Motif
Other DBs
NCBI-GeneID:
120046295
NCBI-ProteinID:
XP_038847312
UniProt:
A0A8U0QRK9
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All DBs
Position
Sna4:complement(20407305..20446788)
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AA seq
805 aa
AA seq
DB search
MGRPTHITQRTKLWIGYFVLFAVTDVSGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGQ
GVAGSSRCDLKRNLLVAGCAPPAALEFPTSKLQVKEDRPLSNKAAGDTADATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAEEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVGRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSVVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTVTFECECKCQAHAEPLSPVCN
NGNGTYECGICLCDPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGAILVLGLVGLLIWKLLVTIHDRREFAKFEEERARAKW
DTGHNPLYKGATSTFTNITYRGNKD
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggcctactcacataacgcaaaggactaaactttggataggttatttcgtttta
tttgcagttactgatgtttcgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacttgtgcgtggtgttcccaagaggactttggacag
ggggtggcaggctcgtctcgttgtgacctgaagcgtaacctattggtggcgggctgtgct
cccccggccgcccttgagttccccaccagcaagctgcaggtgaaggaggaccggcccctc
agcaacaaggcagccggagacacggccgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaggac
tacccggtggacctgtattacctcatggacctgtccttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccgaggaaatgggacgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcgccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcacgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaagtgggccgcttcactgaggaggtgaagaaa
caaatcgtgtccaggaacagagatgcccccgagggaggctttgacgccattatacaggct
gccgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaagacccacgtggcgcttgatgggcgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtgtcgtggtgcccctctaccagaactacagtgagctgattcctgggaccact
gtgggcaccctgtccaatgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctctcc
ttcaacgccacctgtctcaatggagaggtcatccctggcataaagtcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgccccaaggac
aagcgcaagacgttcgtcatcaagcctgtgggcttcaaggactctctgaccgtcactgtc
accttcgagtgcgagtgcaagtgccaggcccacgccgagccactcagccctgtctgtaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtgacccggggcgactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggaggggc
gactgcgtgtgcgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgttacaagggcgagctgtgctcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgcggggcctgcgagtgcacccagccgggggcctacggggccacgtgcgac
aagtgccccacctgccccgatgcctgcaccatgaagaaagagtgtgtggaatgtaaacat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctagtggacgaccttgagttccatgataaaaatgctgtgaactgcacctataaggat
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcctgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccggggccatcttggttctgggtctggtcggcctgctcatctggaagctgctggtc
accattcatgaccgccgtgagttcgccaagttcgaggaggagcgtgctcgcgccaagtgg
gatacgggccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggactga
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