KEGG   Salvelinus namaycush (lake trout): 120046295
Entry
120046295         CDS       T07522                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03266  Virion - Herpesvirus
snh04081  Hormone signaling
snh04145  Phagosome
snh04148  Efferocytosis
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
snh04810  Regulation of actin cytoskeleton
snh04820  Cytoskeleton in muscle cells
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    120046295
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    120046295
   04512 ECM-receptor interaction
    120046295
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120046295
   04148 Efferocytosis
    120046295
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120046295
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120046295
   04810 Regulation of actin cytoskeleton
    120046295
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120046295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120046295
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120046295
   04515 Cell adhesion molecules [BR:snh04515]
    120046295
   04090 CD molecules [BR:snh04090]
    120046295
Membrane trafficking [BR:snh04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    120046295
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120046295
Cell adhesion molecules [BR:snh04515]
 Integrins
  Integrin beta subunits
   120046295
CD molecules [BR:snh04090]
 Proteins
  120046295
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2 EGF_integrin EGF_TEN EGF_Teneurin BNR_6
Other DBs
NCBI-GeneID: 120046295
NCBI-ProteinID: XP_038847312
UniProt: A0A8U0QRK9
LinkDB
Position
Sna4:complement(20407305..20446788)
AA seq 805 aa
MGRPTHITQRTKLWIGYFVLFAVTDVSGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGQ
GVAGSSRCDLKRNLLVAGCAPPAALEFPTSKLQVKEDRPLSNKAAGDTADATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAEEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVGRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSVVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTVTFECECKCQAHAEPLSPVCN
NGNGTYECGICLCDPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGAILVLGLVGLLIWKLLVTIHDRREFAKFEEERARAKW
DTGHNPLYKGATSTFTNITYRGNKD
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgggtaggcctactcacataacgcaaaggactaaactttggataggttatttcgtttta
tttgcagttactgatgtttcgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacttgtgcgtggtgttcccaagaggactttggacag
ggggtggcaggctcgtctcgttgtgacctgaagcgtaacctattggtggcgggctgtgct
cccccggccgcccttgagttccccaccagcaagctgcaggtgaaggaggaccggcccctc
agcaacaaggcagccggagacacggccgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaggac
tacccggtggacctgtattacctcatggacctgtccttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccgaggaaatgggacgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcgccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcacgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaagtgggccgcttcactgaggaggtgaagaaa
caaatcgtgtccaggaacagagatgcccccgagggaggctttgacgccattatacaggct
gccgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaagacccacgtggcgcttgatgggcgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtgtcgtggtgcccctctaccagaactacagtgagctgattcctgggaccact
gtgggcaccctgtccaatgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctctcc
ttcaacgccacctgtctcaatggagaggtcatccctggcataaagtcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgccccaaggac
aagcgcaagacgttcgtcatcaagcctgtgggcttcaaggactctctgaccgtcactgtc
accttcgagtgcgagtgcaagtgccaggcccacgccgagccactcagccctgtctgtaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtgacccggggcgactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggaggggc
gactgcgtgtgcgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgttacaagggcgagctgtgctcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgcggggcctgcgagtgcacccagccgggggcctacggggccacgtgcgac
aagtgccccacctgccccgatgcctgcaccatgaagaaagagtgtgtggaatgtaaacat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctagtggacgaccttgagttccatgataaaaatgctgtgaactgcacctataaggat
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcctgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccggggccatcttggttctgggtctggtcggcctgctcatctggaagctgctggtc
accattcatgaccgccgtgagttcgccaagttcgaggaggagcgtgctcgcgccaagtgg
gatacgggccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggactga

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