Salvelinus namaycush (lake trout): 120046446
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Entry
120046446 CDS
T07522
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
snh03029
]
120046446
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
120046446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
120046446
NCBI-ProteinID:
XP_038847616
UniProt:
A0A8U0QNG4
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Position
Sna4:complement(32979946..33018079)
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AA seq
1370 aa
AA seq
DB search
MAARWGAGDEILAACNMEFFSTNTLDEVVNLHGGLSSESVARLELDTGEALEALHCCLDP
SILSIFEDTPSGENKFGLDEVNQATLLTALTEILDNVDNENLSHFDTLPDSDLLSGQKYR
EHSPLRRLLCLSRSPPERETLCNTRQFSTGKSLPRTQKSVQRSDGEEEEDGEQELLNWDG
LNLPLPLALEQHMGEEGEDGESMSVSLGELVRHMHPYCMAVCMENGEGEEQMLAEKRILL
EVVDQGVHRESIFALPDMGLSLCHPSFSLPGVEDSSEAEQRVPDEVLEAAILETQESAND
DVVIGDDPAEVAGPSDPAVTLRSEARGEKVINRRPKEETAERCPSRRKRKRKNKMENSPP
EVTPEPDQAERRVLRRAAQESSPCEPVKEIAKPKKKDKNKSLTSAISRAAPEAPKHKTRA
THTAEKHVEVTTLVLPKQPSIKVMPASDLLPMTMTPEKVSQPTTACGKSQGPTASIANPT
AHQLMEAPQAMTINLPSANPVSVAPQPTMQPNIAPLVAHQAIPPQAIEPKPKPLSLQQYR
LLRQQKKLAPLERLEDQSVKWPILLEAPTELPPIPCLPTPSSRGPHPSPGKNEVEEVKAA
WQPMGPGAPPTPEALLVPPAYMQASKSYSSSKVAIENAALTTPPQQAAIPTPQSSKASQL
QPLISAMPASSTVKVIPSQTPSTKAQTLSVKCCIPRAPQPALSNPLLQSQLPSLKPVALI
KSQSSSGASSKTTTDTHRSTLIAPIPQKPTPVATIVPKRTLNPNTAAVCVQKPTPAAALK
VSTNLQKGVVAMPQPRVPELPTITPVSTLAKPSNAQAFKPPVFKPPVRCSPAQEAPKARS
PTQELMEAFTSEIGIEAADLTSLLEQFEETQAKEEQCVPEVSGRAAAVGNSSVAQPCDRT
PVERVQAHDLTSTADLTPPATPPHQMWKPLVPIALLGKSQATEAPKPSPSKAIQIDTQPL
PSNKLRSKPSSPPITPTPNPVSLTLAFSDHDYSLLQKEPMAIAREPGKRWNVKQQAAITI
EPLGSNTTWVPQRIPAPSLQTLTTALGTKNHQAPLVPQPLDVKTDRTSSVLETPDASPTR
LMDQAGPLERSPKKGRSYRSYNNTFSHRPSPSPREGKRGRKRKRSIHRSSSPDFTDSESD
SSSQSRSRSLPRKRYRPRHSDSSFSASSCSSSRSSSRSLACFPRRRRYSYSSSRSGSWSR
SRSRSPHRRAWSRCSRQRSPSFRPGYRPESRENSEVGKRLKDKAVEERRVVYVGRIRETM
THKELKERFSLYGEIEECTLHFRGHGDNYGFVTYYDTKDAFTAIENGSKLRKPDELPFDL
CFGGRRQFCKTSYADLDSNREYDPSAPVTGKFDALDFDTLLKQAQKSLKR
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggtggggagcaggcgatgaaattttagctgcctgcaacatggaatttttc
tcaacaaatactctagacgaggtggtgaatctccatgggggcctgtccagtgaaagcgtg
gccagactggagctggatacaggagaggctctggaggccctccactgctgtctggacccc
tccatactgtccatctttgaggacacaccctcaggagagaataaatttggacttgatgag
gtgaaccaggctacgctgctcacagctttgacggagatcctggataacgtggacaatgag
aacctttcccactttgacacactgccagactcggacctactgtctggccagaaatatcgg
gaacactctccgctgaggagactgctgtgcttgtcccgctcgcctccagagagagagaca
ctctgcaacacacgacagttctccacaggaaagagtctccccaggacacagaagtctgtc
cagaggagtgacggagaggaggaagaggatggagagcaagagctcctgaactgggatggc
ctgaatctgcctctcccgctggctctggagcagcacatgggggaagagggcgaggatgga
gagagcatgtcagtgagtctaggagagctggtcagacacatgcacccctactgcatggcc
gtgtgcatggagaatggggaaggggaagaacagatgctggcagagaaaaggatactgctg
gaggtggtggaccagggagtgcatcgagaatctatatttgccctcccagatatgggcctc
tccctctgtcatccctctttctccttgcctggagtagaagactcatccgaagcggagcag
agggttccagatgaagttttggaggccgccattttggagacacaagagtctgcgaatgat
gatgtcgtaattggggatgacccagcagaggtggctggcccttctgaccccgcggtgacc
ctgaggtcagaggcaaggggtgagaaggtcatcaacaggagaccaaaggaggagactgca
gagagatgtccgtctcgaaggaaaaggaaacggaaaaacaaaatggagaattcacctccc
gaagtcacacctgaacctgaccaggcagagaggagggtcctgaggagagcagcccaggaa
tcctcgccctgcgagcctgtcaaggagatagccaaaccgaagaaaaaggacaagaacaag
tcgttaacttccgccatttctagggccgcccccgaggcgccaaaacacaagacgagagcg
acacataccgccgaaaaacatgtggaagtcaccaccctagtacttcccaaacaacccagc
attaaggtcatgcccgcctctgacctgttgccaatgactatgacccccgagaaggtctcc
caaccaaccacagcctgcgggaagtctcaaggccccacagcttctatagctaacccaact
gcccaccagttgatggaagccccccaggcaatgacaatcaaccttcccagtgccaaccct
gtatcagtggcccctcagccaacgatgcagcccaacattgcccctctagtggcccaccag
gcgatcccccctcaggctattgaacccaaacccaagcccctgtccctccagcagtaccgg
ttgctgcgccagcagaagaaacttgcccccctagagagactggaggaccagagcgtcaag
tggcccatcctccttgaggcccctacagagctgccccccatcccctgcctccccaccccc
tcctccagaggcccccacccctccccggggaaaaatgaggtggaggaagtgaaagcagcc
tggcagcccatgggaccaggagcacctcctacacctgaagccctgctggtgcctcctgct
tacatgcaggcctccaagtcatattcctctagcaaagttgctattgaaaatgcggccctt
accacccctccccagcaagcggctattcctactccacagtcatctaaagctagccaactc
cagcccctaatctccgctatgcctgcatccagtactgtgaaggtgataccatcccaaacc
ccctctaccaaggcccagaccctttctgtgaagtgttgtataccccgggccccccagcct
gcactctcaaaccccctgctccagtctcagctaccctccttgaagcctgtggcccttatc
aaatctcagagctccagtggagcctcttctaaaaccactacagatacccacaggtccacc
ttaattgctcctataccccaaaaacccacccccgtcgctactattgtacccaagagaact
ttaaaccccaacactgctgctgtttgtgtacagaaacctacccctgctgctgctctgaag
gtgtctactaatctccagaagggagtagttgctatgccccagcctagggtgcctgagcta
cctaccatcacgcctgtgtctaccctagccaagccctccaacgcccaggccttcaaacct
ccagtcttcaaacctccagtgaggtgttctccagcccaggaggcccccaaagccaggagt
cctactcaggagctgatggaggccttcaccagtgaaatcggtattgaagctgcagacctc
accagcctgctggagcagtttgaagagacacaagctaaagaggagcagtgtgttccggag
gtctctggtagagcagcagctgtaggaaactctagtgtggcgcagccatgtgataggacc
cctgtggagagagtccaagcgcatgacctgaccagcactgcagatctgactcctccagct
acccctcctcaccagatgtggaagcccctggtcccaattgccctccttggtaagagccaa
gccactgaggcccccaaaccatcaccctccaaggccatccagatcgacacgcagcccctg
ccctccaacaagcttcggagcaagccctccagcccccctataactcccacccccaatcca
gtgtctctcaccctggccttttcagaccacgactactccctccttcagaaggaacccatg
gctattgcaagagagccaggcaagcgctggaatgtcaaacagcaagcagccatcaccatc
gagccacttggcagcaacactacctgggtaccccagaggatccctgccccctccctccaa
accctcacaactgccctgggtacgaagaaccatcaggcccccctagttccccagcccctg
gatgtaaagactgacaggactagctctgtgctggagacccctgatgcctctcccaccagg
ctgatggaccaggctggtcccctggagaggagtcccaagaaagggaggtcttaccgaagt
tacaataataccttctcccacaggcctagcccaagccccagggaaggaaagcgaggaagg
aagaggaaaaggagtatccaccgttcctccagccctgactttactgactcggagtcggac
tcctcttctcagtctagatctcgctctctacccaggaagaggtacaggcctcgtcactct
gatagcagcttcagtgcctcatcttgctcctcctctcgttcctcctctcgttccctggcc
tgctttccaaggcggcggcgatattcctactcctcttcccgatcaggatcatggagtagg
tcccgttcccgctctccccacagacgggcgtggagtagatgcagcagacaacgcagcccg
tctttcagaccaggctaccggcctgaatctagagaaaacagtgaggtggggaagagactg
aaagataaagccgttgaggagcgtcgggttgtttacgtagggcgaatccgagagacaatg
actcataaagagctgaaggaacgcttctctctgtacggagagattgaggagtgcacttta
catttcagaggccatggggataactatgggtttgtgacctactacgatacgaaggatgca
ttcacggccatcgagaacggcagcaagctccgtaagcctgacgaactcccctttgacctc
tgcttcggaggaaggagacagttctgcaagacgagctatgctgatctagattctaaccgc
gagtatgacccgtcggcacccgtgactggcaagtttgatgcccttgactttgacacttta
ctgaagcaggcccagaagagtctgaagaggtaa
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