Salvelinus namaycush (lake trout): 120046556
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Entry
120046556 CDS
T07522
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120046556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120046556
03016 Transfer RNA biogenesis [BR:
snh03016
]
120046556
03012 Translation factors [BR:
snh03012
]
120046556
04131 Membrane trafficking [BR:
snh04131
]
120046556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120046556
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120046556
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120046556
Translation factors [BR:
snh03012
]
Eukaryotic type
Elongation factors
120046556
Membrane trafficking [BR:
snh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120046556
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120046556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
120046556
NCBI-ProteinID:
XP_038847826
UniProt:
A0A8U0QNU5
LinkDB
All DBs
Position
4:complement(43631080..43633815)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYSPDMVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacattgtggtgatcggccacgtggactctggaaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgag
aagtttgagaaggaggctgctgagatggggaagggctcatttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcattaccattgacatctcactgtggaagttt
gagaccagcaggtactacgtcaccattatcgatgctcccggacacagggatttcatcaag
aacatgattactggaacctcccaggcggactgtgcagtgctgatcgtggcggccggcgtg
ggtgaattcgaggcgggcatctcaaagaacgggcagacccgcgagcacgccctcctagcc
tacaccctgggggtcaagcagctgatcgtgggaatcaataaaatggactccactgagccc
aactacagccagaagcgctatgaggagattgtgaaggaagtcagcacctacatcaagaag
atcggctacagcccggatatggtagcctttgttcctatctctggctggaacggagacaac
atgctagaggccagtcctaacatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgccatccagcccccgtcccgc
cccaccgacaagcccctccgcctgcccctgcaggatgtctacaagattggaggaattggc
acagtgcccgtggggcgtgtggagacgggtatgatcaagccaggcatggtggtgaccttt
gcccctgttaacgtgacaaccgaagtgaagtctgtggagatgcaccacgaggctctgacc
gaagcaatgcccggagacaacgtgggcttcaacgtcaagaacgtgtccgtcaaagacatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagccgtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctggctatgccccggtg
ctggactgccacaccgcccacatcgcttgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaaactggaggacaaccccaaggccctgaagtctggagatgccgcc
atcgtggatatggtcccggggaagcccatgtgtgtggagagcttctctgagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgatcaagggt
gtggagaagaaagctccctccactggcaaggtcaccaagtccgcccagaaggcccagaag
accaaatga
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