Salvelinus namaycush (lake trout): 120046600
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Entry
120046600 CDS
T07522
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120046600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120046600
03016 Transfer RNA biogenesis [BR:
snh03016
]
120046600
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
120046600
Messenger RNA biogenesis [BR:
snh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
120046600
Transfer RNA biogenesis [BR:
snh03016
]
Prokaryotic type
tRNA degradation factors
120046600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KRR1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
120046600
NCBI-ProteinID:
XP_038847898
UniProt:
A0A8U0QRG0
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Position
4:complement(51934418..51943009)
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AA seq
779 aa
AA seq
DB search
MYNVSFYLNMRHLLRLGPSLARLNVRLCHQSVWNSHGTIRKVRVDFGEKKLEISTGKLAR
FADGSAVVQLGDTTVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGTTE
NEILTSRLIDRAIRPLFPAGYFYDTQVLCNLLAVDGVNDPDVLAINGASAALSLSDIPWN
GPIGAVRIGLVNGEFLVNPTRKEMASSTINLIVAGAPLSQVVMIEASAENVLQQDFCHAV
KVGVKHTQQIILAIQQMAREAKVSKRTPPKIFSAPLEMIELARQLASEKVYAVFTDFTHD
KISRDDAINKVRLETEEQIKEKYPQAEPYEVMESFNMVSKEVFRNLVLNEYRRCDGRDLT
SLRNISCEADIFKPLHGSALFQRGQTQVLCSVTFDSLESSIKTDIITTALSGVKDKNFML
HYEFPPYATNEIGKMSGMNRRELGHGALAEKSLRPVIPKDFPFTIRVTSEVLESNGSSSM
ASACGGSLALMDAGVPISSAVAGVAIGLISKANPEKPSEIQDYRILTDILGIEDYLGDMD
FKLAGTNKGINALQADVKIPGLPLKLVMEAIQQATVAKREILGIMNKTIAKPRDKRKENG
PVVENVRVPVSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFI
TEICKDDQEQLLEFGAVYTATIMEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALG
LEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSISMGTGDGQATSTSS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtataatgttagcttttacttgaatatgagacatttactgagacttgggccctcgctg
gctcgactaaatgtgcggttgtgccaccaaagcgtctggaacagtcatggaacgatacga
aaagtgagagtggacttcggtgagaaaaaacttgagatctcaacagggaaacttgccaga
tttgcagatgggtcggctgttgtgcagcttggggatacaacagtgatggtgacagctgtc
agcaaaacaaaaccatccccctcccaatttatgcctttagtggtggactacaggcaaaaa
gcagctgctgctggtagaatccccactaaccacctgcggcgggagttgggcaccactgaa
aatgagattctgactagtaggctaatagacagggcaatcagaccgctttttccagctggt
tatttctatgacactcaggtcctgtgtaacctgttggcagttgatggtgttaatgatcca
gatgtactggccattaatggagcctctgctgctctatccctgtctgacattccctggaat
gggcccattggtgcagtgcgcattggcctggtgaatggagagtttctggtgaacccaaca
cgaaaggaaatggcttccagcactatcaacctgatagtggctggagcaccgctcagccaa
gtggtgatgatagaggcttctgctgagaatgtgttgcagcaggacttctgtcatgcagtc
aaggttggtgtgaagcacacacagcagatcatactggcaattcagcagatggccagagaa
gcaaaggtgtccaagcgcactcctcccaaaatattttctgctcccctggaaatgattgag
cttgcgcgacagttggcctctgaaaaggtctatgctgttttcacagacttcactcatgac
aaaatttccagagatgatgccattaataaagtaaggcttgaaacagaggaacaaataaaa
gagaaatatcctcaagctgaaccttacgaggtgatggagtccttcaacatggtatcaaaa
gaggttttccgcaatctggttttgaacgagtacaggaggtgtgatggaagagacctgact
tcattgagaaatatttcctgtgaggcggacatctttaagccccttcatgggtctgcactt
ttccagaggggacagacacaggttctgtgctctgtaacatttgactccttggagtctagt
attaaaacagacatcattactacggcgttaagtggagtcaaagacaagaatttcatgctt
cactatgagtttccaccttatgcaaccaatgagattggaaagatgagtggaatgaacaga
agagagcttggtcatggggcactggctgagaagtctttgagacctgtcattcccaaagac
ttccccttcacaattagagttacctctgaggttctggagtctaatgggtcctcgtctatg
gcatcagcatgtggaggcagtctggctttgatggatgctggtgttcctatttcatcagct
gtggcaggtgttgctattggactcatatccaaggcaaacccagagaagccatcagaaatc
caggactaccgaatattgactgatattctgggaatagaggattacctaggagacatggac
ttcaaactggcaggaacaaacaagggtatcaatgccttacaggctgatgtgaagattcca
ggcttacctctgaaacttgtaatggaggctattcagcaagccacggttgccaagagggag
attttgggcatcatgaacaagaccattgccaagccaagggataaaagaaaggagaatggt
ccagttgtcgagaatgtcagagtccctgtctctagacgagcacgctttgtcggaccaggg
ggatataacctccgcagactacaagctcaaacaggtgtgacgataagccaggtggacgag
gagaccttctctgtgtttgcacctactccaggtgccatgaatgaagcccaggaattcatc
acagaaatctgcaaggatgatcaagagcagctgctggagtttggtgctgtttacactgcc
accatcatggaaataagggacattggtgtcatggtgaagctatatcccaacatgagtgct
gttctgctccataactctcagctggaccacaaacggataaaacacccaagtgctcttgga
ttagaagttggacagcagattcaggttaaatactttgggcgagacccaacagatggtaga
atgaggctttcgaggaaggtgttacaatctccagcagcaacagttgttaagacactgagt
gagaaacagagcatctccatgggcacaggggatggccaagcgaccagcacctcctcttga
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