Salvelinus namaycush (lake trout): 120046611
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Entry
120046611 CDS
T07522
Name
(RefSeq) atlastin-2-like isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046611
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120046611
Autophagy
ER-phagy
ER-phagy recepters
120046611
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Motif
Other DBs
NCBI-GeneID:
120046611
NCBI-ProteinID:
XP_038847913
UniProt:
A0A8U0QRH0
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Position
Sna4:complement(53013904..53039056)
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AA seq
611 aa
AA seq
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MAEVRLSGLSKRNHFEQNHKRHVFDEGAGGVEDVPLSLPDRRPRRRIAPRAEADSETDEW
EQAPELSHVREQPIEEQPMVGLEKARPIQIVLAHEDDHKFELDTEALEKLLLQEDVRDLN
VVVVSVAGAFRKGKSFLLDFMLRYMLNQQQEQSDSWVGGDDDPLTGFSWRGGCERETTGI
QVWSQVFVVNKPDGSKVAVLLVDTQGAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQ
EDDLQHLQLFTEYGRLALEEIYLKPFQSLMFLIRDWSYPYEHNYGLEGGNRFLEKRLQVK
QNQHEELQTVRKHIHSCFSNIGCFLLPHPGLKVATNPMFDGRLKDIDGDFKEALSNLVPL
LLAPENLVEKEIGGAKVTCRDLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLTAVAGA
KDTYSKSMEMVCGGDKPYIAPADLERCHEEVKECSLRQFRSVKKMGGEDFCKKYQEQLEG
ELDEAYSNFHKHNEGKNIFYAARTPATLFVVMFATYIVSGLTGFIGMNTIAMLANLVMGV
ALMTLCMWAYVKYSGEFRDVGTIIDLLAETLWEQVLKPLSEQYMEDNVRQTVVNSIRASL
TEQVTQHAKSH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgagattgagcgggctgagtaagaggaatcatttcgaacaaaaccacaaa
agacacgtctttgacgaaggtgcaggtggtgtggaggatgttcctctgtccctgccagat
cggaggcctcgtcgcaggatagcgcctcgggcagaggctgacagcgagacagacgagtgg
gaacaggcccccgagctgagtcatgttagggagcagccaattgaagagcagcctatggtg
gggttggagaaggctcggcccatccagatagtcctggcccacgaggacgaccacaaattt
gagctggacacggaggccctggagaagctcctactgcaggaggatgtcagagacctcaat
gtggtggtggtgtctgtcgccggggccttccgcaagggcaagtccttcctgctggacttc
atgctccgatacatgctcaaccagcagcaggagcagtcagactcgtgggtggggggtgat
gatgatcctctgacagggttcagctggagaggaggctgtgagagggagaccacagggatc
caggtctggagtcaggtgtttgtggtcaacaagccagatgggagcaaggttgctgttctg
ttagtggacacacagggagcctttgacagccagtccaccataaaggactgtgcaacagtt
tttgccctgagcaccatgaccagctctgtacaggtgtataacctgtctcagaatattcag
gaggatgaccttcagcatctccagctcttcacagaatacggccggcttgctttggaggaa
atctatctaaaaccctttcagtcactcatgttcctgatcagagactggagctatccatac
gaacacaactatggactggagggagggaaccgctttctagagaagagactgcaggtgaaa
cagaaccagcacgaggagctgcagactgtgaggaaacatatccactcctgcttctccaac
atcggttgcttcctactgccccaccctggcctcaaggtggccactaaccccatgtttgac
ggaagattaaaagacattgatggtgacttcaaggaggcgctgagcaatctggtgccctta
ctgctggctcctgaaaacctggtggagaaggagattggaggggcgaaagtgacctgcaga
gatctagtggagtattttaaggcctatataaagatctatcaaggtgaggagcttcctcat
cccaagtccatgttacaggcaacggctgaagccaacaaccttacagcagttgctggagca
aaagacacgtacagcaaaagcatggaaatggtgtgtggaggggacaagccctacattgcc
cctgcagacctggaacgttgccacgaggaggtcaaggagtgctcgttgcgtcagttccgc
tccgtgaagaagatgggtggagaggacttctgcaagaaataccaggagcagctggagggt
gagctggatgaggcctactccaacttccacaagcacaacgagggcaagaacatcttctat
gccgcacgcacgcccgcaacgctgttcgtcgtcatgttcgccacctacatcgtctcaggg
ctgaccggcttcatcggaatgaacactattgccatgctggccaacctggtcatgggcgtg
gccctcatgacgctctgcatgtgggcctatgtaaaatactcaggggagttcagagatgtg
ggcaccatcatagacctgttggcagagacactctgggaacaggtgttgaagcctctgagt
gagcaatatatggaggataacgttagacagactgtggtcaactccatccgagccagtctg
acagaacaggtcacgcagcacgccaagtcacactga
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