Salvelinus namaycush (lake trout): 120046678
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Entry
120046678 CDS
T07522
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120046678 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120046678 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120046678 (srsf2a)
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120046678 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
120046678
NCBI-ProteinID:
XP_038848014
UniProt:
A0A8U0QST2
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All DBs
Position
Sna4:complement(58645818..58650356)
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AA seq
199 aa
AA seq
DB search
MSYGRPPPDVEGMSSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGSGPPRRHGGYGRRSR
SASPRRRRHSRSRSRNRSRGRDYSRSRSRSYSRSRSKSRTPRKSKSPSRSRSRTPPSNRG
SRSRSKSMPKSPDDNGTES
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggcctccgcccgatgtcgagggtatgtcctcgctcaaagtggacaat
ctcacgtaccggacttcgcccgagaccctacgccgagttttcgagaagtatggccgggtg
ggagacgtgtacatcccccgcgatcggtacaccaaggagagccgcggtttcgcctttgtg
cggttccacgataagcgcgacgctgaagacgcgatggacgccatggacggggccttgctc
gatgggcgggaactgcgagtgcagatggcgcgatatggccgtccaccagactcccacttc
gggcgccgaggcggcagtggacccccaaggaggcatggaggctacgggcgcaggagtcgt
tcggccagcccccgccggcgaagacacagtcgttcccgaagcaggaaccgcagtcgtggc
cgtgactacagccgctcacggtctcgttcctactctaggtcccgttccaagtcccgcaca
ccccgcaagagcaagtccccatcaaggtcccgcagccgcaccccgccttctaacagaggc
tcacggtcgaggtccaagagcatgcccaaatcccccgatgacaacggaacagagtcttag
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