Salvelinus namaycush (lake trout): 120046709
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Entry
120046709 CDS
T07522
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120046709
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120046709
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
120046709
NCBI-ProteinID:
XP_038848079
UniProt:
A0A8U0UC20
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Position
Sna1:complement(62179251..62199371)
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AA seq
625 aa
AA seq
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MNICDDLMADQRMDISSTMNEFMSPGSTDLISSIGTPGMDYTRKRKSSTTDYQIDGFSFE
DSMDTDNDRLGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRASDGFLFVVGCDRGKILFVS
ESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDSKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPLIKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDDDNEPDNEGCNLSCLVAIGQLHPHIVPQPMNNEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVCVPEGSDGIYPQLAASPQSMDSVLTDGTGKRA
LHTVPGIPGGTRAGAGKIGRIIAEEVMEIQRIRGSSPSSCGSSPHNFTSTPPPDMSSPGG
KKIQNSGTPEHPSAGLIPGPDSVGYPYSNNSNLSDNSHIGIDIMDEPGSSSPSNDEAAMA
VIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgtgatgatctaatggcagaccaaagaatggacatttcctccacgatgaac
gagttcatgtctcccggctccactgatctaatcagctcgatcggcacacccggcatggac
tacacacgcaagagaaaaagcagcaccacagactaccaaattgatggattttcttttgag
gatagcatggacacagacaatgatagacttggtgatcatcaaggccggattaaaaatgcc
agggaggcccacagtcagattgagaagagacgcagggacaagatgaacagcttcatagac
gagctggctgcactagtgcctacatgcaacgctatgtcccgtaaactggacaaactaaca
gtcctgcgcatggctgtccagcacatgaagaccttaagaggtgctgctaacccctacact
gaagctaactacaaaccagccttcctgtcagacgacgaactgaagcacttaatactgagg
gcatctgatggctttctgtttgttgttggctgcgatcgagggaagatactgtttgtttcg
gagtcagtctacaaaatcctaaactacagccaaaatgacctgattggccagagcctgttt
gattacctgcatcctaaagacattgccaaagtcaaggagcagctgtcctcgtcggacacg
gcgccacgggagcgcctcatcgattccaaaactggccttccagtaaagacagacatcacc
cccggcccatccagactttgctctggagccaggcgatccttcttctgcaggatgaagtgc
aatcggcccctcattaaaatggaggacaaggactttccttccacctgctccaagaagaaa
gctgaccgtaagagcttctgcacaatacacagtactggctacctgaagagctggccaccc
accaagatgggtctagatgatgacaatgaaccagacaacgagggctgcaacctcagttgc
ctggtggccattggacagctgcatccccacattgtccctcagccaatgaacaatgagatc
cgtgtcaaacccactgagtatgtctcacggcatgccatcgatgggaagtttgtctttgtt
gatcagagggccactgccattttggcttatctaccccaagagttgctgggtacatcgttt
tatgaatactttcatcaagatgacatagggcaccttgcggaatgtcatagacaagtgctc
cagatgagggagaagatcaatacaaactgctacaagttcaaaataaaagacggctccttt
atcacactgaggagtcgctggttcagttttatgaacccttggaccaaagaggtggagtac
attgtctccaccaacactgttgtctgtgtgcctgaaggatctgatggcatctatcctcag
ctcgccgcctccccccagagcatggatagtgtactcacagacggaaccggcaagcgggcc
cttcataccgtgcctggcatccccggcggcacaagggcaggggcgggaaagatcggccgg
ataatcgcagaagaggtgatggagatccagaggataagaggctcctcgccctccagctgt
ggctccagtcctcataacttcaccagcactccacccccagacatgtcgtccccaggggga
aagaagatacagaacagtggaactccagaacatccctcagcagggctgataccgggacca
gactccgtaggctatccatactccaacaactccaatctaagcgataactctcacattggc
attgacatcatggatgagccaggctccagcagcccgagtaatgacgaggcagccatggct
gtgatcatgagccttctggaggcagacgcagggttgggaggcccagtggacttcagtgac
ctgccctggccactgtga
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