KEGG   Salvelinus namaycush (lake trout): 120046740
Entry
120046740         CDS       T07522                                 
Name
(RefSeq) vinculin
  KO
K05700  vinculin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04517  IgSF CAM signaling
snh04518  Integrin signaling
snh04519  Cadherin signaling
snh04520  Adherens junction
snh04810  Regulation of actin cytoskeleton
snh04820  Cytoskeleton in muscle cells
snh05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120046740
   04518 Integrin signaling
    120046740
   04519 Cadherin signaling
    120046740
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120046740
   04520 Adherens junction
    120046740
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120046740
   04810 Regulation of actin cytoskeleton
    120046740
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    120046740
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:snh04812]
    120046740
   04147 Exosome [BR:snh04147]
    120046740
Cytoskeleton proteins [BR:snh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     120046740
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120046740
SSDB
Motif
Pfam: Vinculin Talin_IBS2B Mob_Pre
Other DBs
NCBI-GeneID: 120046740
NCBI-ProteinID: XP_038848138
UniProt: A0A8U0QRW8
LinkDB
Position
4:complement(66055909..66118039)
AA seq 1066 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDSWANKDTEAMKRALALIDSKMTQAKSWLGDPNAQQGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQITDQVSEMRARGQGASPAAMQKAQQVSQGL
DILTGKVENAARKLEAMTNSKQVIAKKIDAAQNWLADPNGGPEGEENIRALLTEAKKIAD
MCEDPKERDDILRSIGEMAALTAKLSELRRQGRGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQSWMENPTIDDGGVGQAAIRGLVAEGRRLANALPGPYRQE
LLGKCEQVEQLMAQLANLAARGEGESPQARAVAQQLQETLKDLKEKMQEAMTHEVSDIFS
DTTTPIKLLAVASTAPSDAPNRDEVFDERAANFENHANKLGATAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLNASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EIVKAASDELSRTISPMVMDAKAVAGNITDPSLQKGFLDSGYRILGAVAIVRDAFQPQEP
DFPPPPPDLHQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQVLGEMVSEPMMM
AARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGLTLHWIRKTPWYQ
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccggtttttcacactaaaacgatagaaagtatcctagagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaggtggacgggaaagctatcccggatctc
accgcacccgtggctgcggtgcaggcggctgtcagcaacctggttcgggtggggaaagac
actgtccagactacggaggaccagataatgaagagagatatgcctccagctttcatcaag
gtggagactgcatgcaccaagcttgtgcaggcagcatctatgttgaaagcagacccttac
tccgtccccgctcgagattacctcatcgacggctcccggggcatcctctctggcacatcg
gacctgctgctgaccttcgacgaggctgaggttcgtaaaatcattcgcgtctgcaaaggt
atcctggagtacctaaccgtggcagaggtagtggaatctatggaggacctgatcacatac
acaaagaacctgggtccagggatgacaaagatggcaaagatgattgacgagcgacagcag
gagctgacccaccaggaacaccgcgtgatgctggtcaactccatgaacacagtcaaagag
ctgctccctgtactcatctcaggtatcaagatctttgtgacgaccaagacgtccggcagc
cagggagtagaggagtctctgaagaacaggaacttcacctttgaaaagatgagcgctgag
atcaacgagatcattagggtgctgcagctcacttcctgggacgaagactcctgggccaat
aaggatacagaggccatgaagagagctctggcactcatcgactctaagatgacccaggcc
aagagctggctgggggatcccaacgcccaacaaggggatgcaggagaacaggccatccgt
cagatcctggatgaggctgggaaggtgggagagctttgtgctgggaaggagcggagggat
atcctgggcactgccaaaaccctgggccagatcactgaccaggtgtctgagatgagggcc
aggggtcagggggcatctcctgcagccatgcagaaggcccaacaggtctcccagggcctg
gacattctcacgggaaaggtggaaaatgcagcccggaaattggaggccatgaccaactcc
aaacaggtcatcgccaagaagatcgacgctgctcagaactggctcgcagaccccaacggt
ggtcctgagggagaagagaacatccgagccctcctgactgaggccaagaagatcgctgac
atgtgtgaagaccccaaggagagagatgacatcctgaggtccatcggagagatggctgct
ctcaccgccaagctctctgagctccggagacagggtagaggagatactccggaggccagg
gcattggccaaacagatagccacggctctgcagaacctgcagtcgaagaccaacaaggct
gtagccaacagcaggcctgctaaggcagcagtccacctggaagggaagatagaacaggcc
cagagctggatggagaaccctaccattgatgacggtggagtgggccaggcagctatccgg
ggtctggtggcagagggtcgtcgtctggctaacgccctgccaggtccctatagacaggag
ctgctggggaagtgtgagcaggtggaacagttgatggcccagctagccaacctggctgcc
aggggcgagggagagtcgccacaagcacgtgccgtggctcagcagctccaggagaccctg
aaggacctcaaagaaaagatgcaggaagctatgactcacgaagtgtcggacatcttcagc
gacacgaccactccaatcaaactactcgctgtggcctccaccgccccgtccgatgcccct
aacagggacgaggtgtttgacgagagggcggccaactttgagaaccatgccaacaagctg
ggtgccacggcagaaaaggctgccgctgtaggaacagctaacaagagcactgtggagggg
atccaagctgccgtcaagtctacaagggacctgacaccacaggtagtctctgcagcccgt
atccttctgagaaacccaggcaaccaggctgcatacgagcactttgagaccatgaagaac
cagtggattgacaatgtggagaaaatgacaggtttggtggacgaggccatagacaccaag
tctctgttgaatgcctctgaggaggccattaagaaagacctggataagtgtcgtgtggcc
atggctaaccaccagccccagatgttagtggcaggggcaactagcatcgcccggcgggcc
aaccggatcctcctggtggcgaaacgggaggtggagaactctgaggatcctaagttcaga
gagatagtgaaggctgcatctgatgagcttagccggactatctctcccatggtgatggac
gccaaggctgtggctgggaacatcacagatccaagtctgcagaagggcttcctggactca
ggctatcgaatcctgggtgccgttgccattgtgagagatgcgttccagccacaggaacca
gacttcccaccaccacctcctgatctgcatcagctgcacgtcagcgacgagcccgcccca
cccaaaccccctctccccgagggtgaggttcctccccccagaccccctcccccagaggag
aaggacgaggacttcccagagcaggtgttgggagagatggtgagcgagcccatgatgatg
gccgccaggcagctccacgaggaggcccgcaagtggtctagcaagggtaacgatatcatc
ggtgcagccaagagaatggccctgctcatggctgagatgtcccgtctggtgcgcggtggc
agcgggaacaagcgtgccctcatccagtgtgccaaagacatcgccaaggcctcagacgag
gtcacgaggctggccaaggaggtggccaagcagtgcacagacaaacgcatccggaccaat
ctgctccaggtgtgtgagcggatccccaccattagcacacagctcaagatcctctccaca
gtcaaggccaccatgttgggtcgtaccaacatcagcgaggaggagtcagagcaggccaca
gagatgttggttcacaatgcccagaacctgatgcagtctgtgaaggagacggtaagagag
gctgaggctgcctccatcaagatccggacagatgcaggcttgactctccactggatccgt
aagacaccctggtaccaataa

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