Salvelinus namaycush (lake trout): 120046812
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Entry
120046812 CDS
T07522
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04136
Autophagy - other
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120046812
04136 Autophagy - other
120046812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046812
03029 Mitochondrial biogenesis [BR:
snh03029
]
120046812
Membrane trafficking [BR:
snh04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120046812
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120046812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Vps41
CPSF_A
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
120046812
NCBI-ProteinID:
XP_038848264
UniProt:
A0A8U0UDJ8
LinkDB
All DBs
Position
Sna4:74502798..74516575
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AA seq
446 aa
AA seq
DB search
MEERETSDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
RDEAPQEAQPEEEESEDGRSLPPSTSPSYAATVSLPSTPPSSTTLTGYSEDGGAEKGDVI
PEHEFAEGPVCLDDENEFPPVSKQTN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggagacatccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacctctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccgactcaacagacagaggctggtggtgtgtctggaggagtcagtg
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacgccccacaac
ccctcgggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcagaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcttcaggaacaaaactg
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagacgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcgtctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggatggaggagagtgtgttctggtcaggaaacacaggctatttgaa
agagatgaggcgccacaggaagcacaaccggaagaggaggagtcagaggatggaaggtcc
ctcccaccgtcaaccagcccatcatacgctgccactgtgtccctcccctcgaccccacct
tcttctaccactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatc
cctgaacatgagtttgccgagggacccgtctgtctggatgacgagaacgagtttcctccc
gtcagcaaacagaccaactga
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