Salvelinus namaycush (lake trout): 120046827
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Entry
120046827 CDS
T07522
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120046827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120046827
03021 Transcription machinery [BR:
snh03021
]
120046827
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
120046827
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120046827
RNA polymerase III system
TFIIIB
120046827
RNA polymerase I system
SL1/TIF-1B
120046827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
120046827
NCBI-ProteinID:
XP_038848293
UniProt:
A0A8U0QQT8
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All DBs
Position
4:75586607..75595949
Genome browser
AA seq
299 aa
AA seq
DB search
MEQNNSLPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQHRQQQQ
QQASTQQGGVSGGSGQTPQLYHSQTVTTTTLPGNTPLYTTTPLTPMTPITPATPASESSG
IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV
CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF
SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagtttgcctcctttccagggtcttgcctcccctcagggggcaatg
acgcctggaatgcccatcttcagccccatgatgccctatggcagtggtctgactccccaa
cctgtgacgaacaccaacagcctgtctctcctggaggagcagcatcggcaacaacagcag
cagcaggcttcgactcagcagggtggggtgtcagggggctcgggacagacgccacagctt
tatcactcccaaacggtcaccaccaccacactgccgggaaacacccctctctacaccact
acaccgctaacccccatgacacccatcacacctgccacacctgcctctgagagctctggg
attgtcccacaactacagaatatcgtatccactgtgaacttgggctgcaaacttgactta
aaaacaatagcactccgagctagaaatgctgagtacaatccaaagcgatttgctgctgtt
atcatgagaatacgagagccaagaacaactgcacttatcttcagctctgggaaaatggtg
tgcacaggagccaaaagcgaagagcagtcccgcctggcggccaggaaatatgccagagtc
gtgcagaagttgggcttcccagccaaattccttgatttcaagatacagaacatggtgggc
agctgtgatgtcaaattccccattcggttagagggacttgtactaactcaccagcagttc
agcagttatgaaccggagttattccctgggctaatctatagaatgatcaaacccagaatt
gtcctgttgatattcgtttcagggaaagttgtattaacaggtgctaaggtgagaggagaa
atttatgaagcatttgaaaacatctaccccatcttgaaaggattcaggaagacgacgtaa
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