KEGG   Salvelinus namaycush (lake trout): 120046827
Entry
120046827         CDS       T07522                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120046827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120046827
   03021 Transcription machinery [BR:snh03021]
    120046827
Transcription factors [BR:snh03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    120046827
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     120046827
  RNA polymerase III system
    TFIIIB
     120046827
  RNA polymerase I system
    SL1/TIF-1B
     120046827
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 120046827
NCBI-ProteinID: XP_038848293
UniProt: A0A8U0QQT8
LinkDB
Position
4:75586607..75595949
AA seq 299 aa
MEQNNSLPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQHRQQQQ
QQASTQQGGVSGGSGQTPQLYHSQTVTTTTLPGNTPLYTTTPLTPMTPITPATPASESSG
IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV
CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF
SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq 900 nt   +upstreamnt  +downstreamnt
atggagcagaacaacagtttgcctcctttccagggtcttgcctcccctcagggggcaatg
acgcctggaatgcccatcttcagccccatgatgccctatggcagtggtctgactccccaa
cctgtgacgaacaccaacagcctgtctctcctggaggagcagcatcggcaacaacagcag
cagcaggcttcgactcagcagggtggggtgtcagggggctcgggacagacgccacagctt
tatcactcccaaacggtcaccaccaccacactgccgggaaacacccctctctacaccact
acaccgctaacccccatgacacccatcacacctgccacacctgcctctgagagctctggg
attgtcccacaactacagaatatcgtatccactgtgaacttgggctgcaaacttgactta
aaaacaatagcactccgagctagaaatgctgagtacaatccaaagcgatttgctgctgtt
atcatgagaatacgagagccaagaacaactgcacttatcttcagctctgggaaaatggtg
tgcacaggagccaaaagcgaagagcagtcccgcctggcggccaggaaatatgccagagtc
gtgcagaagttgggcttcccagccaaattccttgatttcaagatacagaacatggtgggc
agctgtgatgtcaaattccccattcggttagagggacttgtactaactcaccagcagttc
agcagttatgaaccggagttattccctgggctaatctatagaatgatcaaacccagaatt
gtcctgttgatattcgtttcagggaaagttgtattaacaggtgctaaggtgagaggagaa
atttatgaagcatttgaaaacatctaccccatcttgaaaggattcaggaagacgacgtaa

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