Salvelinus namaycush (lake trout): 120046856
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Entry
120046856 CDS
T07522
Name
(RefSeq) nuclear factor of activated T-cells 5-like
KO
K17335
nuclear factor of activated T-cells 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120046856
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120046856
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Herpes_UL3
Motif
Other DBs
NCBI-GeneID:
120046856
NCBI-ProteinID:
XP_038848353
UniProt:
A0A8U0QQX9
LinkDB
All DBs
Position
Sna1:62585713..62638390
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AA seq
1342 aa
AA seq
DB search
MPSDFISLLSADLDLNSPKSLYSKESVYDLLPKELQLPSSTQQNPAAAMSQKSGGEAVPP
PSAALDSDATTVSSSMTMEGPRSAFPTSSSSIVHSTTSATDQTSAHTGIAAPDEGVSSRV
VAEMLGAEGGTGNSGSAGGGRAGGEKGGGAGSLGGGGRGGASQEAQQHHQMTPSKRRTVL
NISPPPEDLFDDSRMSCQEDQLQDSEQSNSIWMDDSASNFSIVSSSSYNDNTEVPRKSRK
RTPRQRPGPKPASAEEASMDVFDADSAKGPHFVLSQLGSDSKACTKGSSADGSQTTHQKG
GTLASQFPQKSEGKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTLKLEGVNEAVV
LQVFVGNDAGRVKPHGFYQACRVTGRNTTACKEVDIEGTIVIEVSLDPSNNMTLAVDCVG
ILKLRNADVEARIGVAGSKKKSTRARLVFRVNIPRPDGSVLTLQTPSSPILCTQPAGVPE
ILKKSLHSCSVRGGEEVFIIGKNFLKDTKVIFQENVSDEKSWKAEAEIDMELFHQNHLIV
KVPPYQNPAIASAVCVGMYVVTNAGRSHDVQPFTYTPEPVDISVKKEVPSPGKPCSFDQR
MKVIDGALMPPMLPLVKREEVTPMEVSSNLSSAGVFKRTPDVMCSAQQTLDMSSNLPPNN
SPFSNSLPRPASDPDESQTAVFNTAEALSTIQKQDIAPTNSFPVPADSLLQPGPQQFLLE
PREGLGQDRAGNNAGAVGRLSQHVEAPQPAPQQHQLPVFPPDDVAQLEQAVRQLQAKGYC
SQQQQRQQQQIQQQQIQQQQQQQIQQQQIQQQQLQQQQQIQQQQIQQQQIQHQQQQQQVL
ENLRQELFKSQMPMHCGIFQGGSRGENAEQQGSQQGMVQNHGSVFQQAQQQQQQRQQQKQ
QQQAALFQQANELLSIQTNFLHQTPSHPSPPLFHNPSPLAEAQDPQGALFHTQKASPTQE
QVQATLFQNTLTVLSRTSLSPEQPPSVANLFLPQSALPRQLSASGSQQQQLAFLSALQTS
APEPQSVFQAQTQLSPIQQGTPMEQQQPSQPQSQPPQQNSMFQNISPHPPANTLSQTQQQ
QAGLLFCSNPLSTPEQPPSLLFSGQGQMPPMSSSSLNSQEPQNPSMLFSQASMVTVSQQE
SSEPMAFLDQSQVVGNPSEPRQQGLFQEQQPMQLITSSNNGPEQPVSLFMPQSNMAALQG
CMAAQVLPQTGIFSTQNGVAGLQTTTSSPVQQPGSLFHTAVSGSLNQPSETQQPGLFLFG
IQNECGQLINSPGTTLSDQIIAISQSGQNQRESEAQIQSLLNQSMSESGSMQNSMTASQN
MEKIDDLLVSLQEQGNNLTRSY
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgattttatatccctactcagcgcggatctcgacttgaattcccccaaatcc
ctatattccaaagaatcagtgtatgaccttctccccaaagagctgcagctgccatcctcc
actcagcaaaacccagcagcagccatgagccagaagagcggtggagaggcggttcctcct
ccctcagcggcccttgactcagatgccaccaccgtctcctcttctatgaccatggaaggc
cctcgcagtgcttttcccacctcttccagctccatcgtgcactccactacctcagccacc
gaccagacctctgctcacaccggcatcgccgctccagacgaaggtgtaagtagcagagtg
gtggcggagatgcttggcgccgagggcgggactggcaacagtgggagtgctggtggcggc
agggctggcggcgagaaaggaggaggggccggatccctaggtggaggaggaagagggggg
gcatcccaggaggcccagcagcaccaccagatgaccccctccaagcggcggacggtgctg
aacatctcgcctccgcccgaggacctgtttgacgacagccgcatgtcctgccaggaggat
cagctccaggactccgagcagagcaatagcatctggatggatgactccgcctctaacttc
agcattgtcagctccagctcctacaacgacaacacagaggtgccccggaagtcccgcaag
cgcaccccccgccagcgacctgggcccaagcctgcctcagccgaggaggccagcatggac
gtgtttgatgcagacagtgccaaagggcctcactttgtgctctcacagctgggctcagac
agcaaggcctgtaccaaaggaagttcggcagatggctcccaaacaacccatcaaaaaggt
gggaccctagcgagccagttccctcagaagagtgagggcaaggagctgaagatcctggtc
cagcctgagacccagcacagagcccgctacctgactgagggcagcagggggtcagtgaag
gaccgcactcagcagggcttccctaccctaaagctggagggtgtgaatgaggcagtggtg
ctgcaggtgtttgtgggtaatgacgctgggcgtgtgaagccacatgggttctaccaggcc
tgcagggtgactgggcgcaacactacagcctgcaaggaggtggacatcgagggcaccatt
gtcattgaagtgtccctggaccccagcaataatatgaccctggcggtggactgcgtgggg
atcctgaagctgcgtaacgctgatgtggaggctcgtatcggggtggccggctccaaaaag
aagagcacgcgtgccaggctggtgtttcgggtcaacatccccaggccggacggctcggtg
ctcacgttacagacaccgtcgtcccccatcctgtgcacccagcctgcaggggtgcctgag
attctgaagaagtccctccacagttgctcggtgagggggggtgaggaggtcttcatcatt
gggaagaacttcctcaaggacaccaaagtcatattccaggaaaatgtatcagatgagaag
tcttggaaggcagaggctgaaattgacatggagctgtttcaccagaatcacttgattgtg
aaggttcctccttaccagaacccagccatcgcgtctgcagtgtgtgtgggaatgtacgtg
gtgaccaatgctggccgatcccatgacgtgcagccttttacatacactccagaaccagtg
gacatatctgtgaagaaagaagttccatctccaggcaagccctgctcttttgatcaacgg
atgaaagtaattgatggtgccttgatgcccccaatgttgcctcttgtgaagagagaagag
gtcactccaatggaggtctccagcaacctctcttctgctggcgtgttcaagcggaccccc
gatgtcatgtgttcggcccagcagacgctggacatgagttccaaccttccccccaacaac
agcccgttctccaactccttgccgcggcctgccagtgaccctgacgaatcccaaacagca
gtcttcaacactgcagaggccctgagcaccatacagaagcaggacatcgctcccaccaac
tcctttcccgtgcctgcagactctctactccaacctggacctcagcagttcctcctggag
cccagagaggggctggggcaggacagggctggcaacaatgctggggcggtagggaggctc
agtcaacatgtggaggcccctcaacctgccccccagcagcaccagctgcccgtattcccc
ccagacgatgtggcccaactggaacaagcagtgagacaactgcaggccaaagggtactgc
agccaacagcaacagcgacaacagcaacagattcaacaacaacaaattcagcaacaacag
cagcaacaaattcagcaacaacaaattcagcaacagcaactacagcaacaacaacagatt
cagcagcaacagattcagcagcaacaaattcaacaccagcagcaacaacagcaagtgttg
gagaacctgcggcaagagctgtttaaatcacagatgccaatgcattgtggcatattccag
ggcggttctcgaggtgagaacgctgaacagcagggttcccagcagggcatggtgcagaac
catggttccgtctttcagcaggcccaacaacagcagcagcagaggcaacaacagaaacag
cagcagcaagcagcactctttcagcaagccaatgagctcctctccattcagaccaacttc
ctccatcagaccccttctcatccctctccacccctcttccataaccccagccccctggct
gaggcacaggacccacagggggcgctgttccacactcagaaggcctctcccacccaggag
caggtccaggcaaccctcttccagaacaccctgacagtgttgagtaggaccagcctctcc
ccagagcagcccccctctgtcgccaacctgttcctcccccagagtgccctgcctaggcag
ctctccgctagcggcagccagcagcagcagctggccttcctcagtgccctgcagacctct
gcccctgagccccagtcagtgttccaggctcagacccagctttcccccatccagcagggg
acccccatggagcagcagcagccctcccagccccagtctcagccacctcagcagaactcc
atgtttcagaacatctccccccatccacctgcaaacactctctctcagacccagcagcag
caggctggcctactgttctgcagcaaccccctctccactccagagcagccccccagtctg
ctgttcagtggccagggccagatgccccccatgagcagcagcagcctgaactctcaggag
ccccaaaacccctccatgctgttctctcaggccagcatggtgacggttagccagcaggaa
tcctctgagcccatggccttcctggaccagagccaggtggtggggaacccctcagagcct
cgccagcagggcctgttccaagagcagcagcccatgcagctgatcaccagctccaacaac
ggcccagagcagcccgtctctctcttcatgccccaatccaacatggctgccctgcagggt
tgcatggctgcccaggtgctcccgcagacaggcatcttcagcactcagaatggggtggca
ggcctgcagaccaccacctcctcccccgtgcagcagccagggtctctgttccacacagca
gtcagtgggagcctcaaccagcccagcgagacccagcagccaggcctcttcctctttggg
attcaaaacgagtgtggccagctgataaactctcctggaaccactctgtctgatcagatc
attgccatcagtcagtctggtcagaaccagagagagagcgaggcccagatccagtcgctg
ctcaaccagtccatgtctgagtcagggagcatgcagaacagcatgacggcctcccagaac
atggagaagatagatgacctgcttgtcagcctgcaggagcagggcaacaacctcactcgc
tcctactag
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