Salvelinus namaycush (lake trout): 120046862
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Entry
120046862 CDS
T07522
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120046862
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120046862
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120046862
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
120046862
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120046862
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120046862
Prokaryotic type
Other AARSs
120046862
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
120046862
NCBI-ProteinID:
XP_038848366
UniProt:
A0A8U0UD52
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Position
1:62649871..62676056
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AA seq
607 aa
AA seq
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MLTLVVRTSRHQVCQAFGVRSQGVKFALPSAASVPALIQGNRYRGDKSELKRRMKAEKKA
SEKEAKVKEQVEQKETNDQADQNADEETLDPNQYFKIRTQAIQALKGTAEDPYPHKYNVD
LSLTEFIEKYNRLQPGDQLTDIVLNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMATNRS
YKSEEEFVRINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLKD
KETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLDGLGFLEIETPMMNLIPGGAVAKP
FVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYM
AYADYYDLMDITEKLLSGMVKHITGEYKVKYHPEGPEGPTYEIDFTPPFRRVSMTHDLEK
EMGVKFPAADTYDSDETRRFFDELCAKKGVECPPPRTTARLLDKLVGEFLEVTCISPTFI
CDHPQIMSPLAKWHRSEKGLTERFELFVLKKEICNAYTELNDPIRQRELFEQQAKAKAEG
DDESMSIDETFCTALEYGLPPTAGWGMGLDRLTMFLTDSNNIKEVLFFPAMKPDDNKTAP
LIEGTSV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgactctggtggtcagaacttccaggcaccaggtgtgccaagcctttggggtcagg
tcacagggggtaaagttcgctctccccagcgcagcgtcagtcccagctctaattcagggg
aatcgctatcgaggtgacaaaagtgagctgaagaggcgaatgaaagctgagaagaaggca
tctgagaaggaagccaaagtcaaagagcaggttgagcagaaggagaccaatgaccaggca
gatcagaatgcagatgaggagaccctggaccctaaccaatactttaagatccgcactcag
gccatccaggctctgaagggcacagcagaggacccataccctcacaagtacaatgtagat
ctgtcgctcacagagttcattgagaaatacaaccgcctacagcctggagaccagctaaca
gacattgttctcaatgtatcaggtcgtgtccatgccaagagagagtccggggccaagtta
atcttctatgacttgcgaggggaaggcgtcaagctgcaagttatggcaaccaacaggagc
tacaagtctgaagaggagtttgtgcgcatcaacaacaagctgcggcgtggtgacatcatt
ggtgttcgtggtaatccagggaagaccaaaaagggcgaactgagcatcattcccatagag
atgaccctgctttcaccttgcttgcacatgctgccccacctgcactttggtctcaaggac
aaggaaacacgattccgccagcgatacctggatctgattctcaatgactatgtgaggcag
aagtttgtaacacgtgccaagatcatcacttacctccgcagcttcctggacgggctggga
ttcctggagattgagacgcccatgatgaacctgattcctggtggggccgtggccaaaccc
tttgtgacctaccataatgacctagacatgaacctttacatgaggatcgctcctgagctc
taccacaagatgcttgtggttggggggattgacagagtgtatgagattggacggcagttc
agaaacgaaggcattgacctcacccacaatccagagttcaccacctgcgaattctatatg
gcctatgcagattactatgacttgatggatatcacagagaagcttctctcggggatggtc
aagcacatcactggagagtacaaagtgaagtatcatccagaaggtccagagggcccgacc
tatgagatcgacttcactcctcccttcaggagggtcagcatgacacacgacctggagaag
gagatgggcgtcaagttcccagctgctgacacctacgacagtgacgagacccgtagattc
tttgatgaactgtgtgccaaaaaaggagtggagtgccctcctcctagaaccactgcccgc
ctccttgacaagttggtgggagaattcctggaagtcacatgtatcagccccacgttcatc
tgtgaccacccacagatcatgagccccctggccaaatggcaccggtcagagaaaggcctg
acggagcgttttgagctgtttgtattgaagaaggagatctgtaatgcctacactgagttg
aacgaccctatcagacagagggagctctttgagcaacaggctaaggccaaggcagagggt
gatgacgagagcatgtccattgatgagactttctgcacggcactagagtatggcctgcca
ccaactgctggctggggcatgggccttgaccgccttaccatgttcctcacagactccaac
aacattaaggaggtgctgttcttccctgccatgaagcctgatgacaacaagacagcccct
ctcatagagggcacctctgtgtag
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