Salvelinus namaycush (lake trout): 120046867
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Entry
120046867 CDS
T07522
Name
(RefSeq) polycomb group RING finger protein 5-B-like
KO
K11489
polycomb group RING finger protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120046867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120046867
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
120046867
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-Nse
zf-RING_6
zf-RING_10
TRAF3_RING
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120046867
NCBI-ProteinID:
XP_038848370
UniProt:
A0A8U0QS98
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Position
Sna4:83069267..83089823
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AA seq
240 aa
AA seq
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MATRRTPLVQTSLVKDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIIQHFEDSNDCPK
CGIQVHETNPLEMLRLDNTLEEIIFKLVPGLREKEGQQEIDFWRKNKSKEISQGDGLVSK
KLGLSDEDGDEDDQDYHRSDPQIAICLDCLHNNGYAADNTVKCLMKKFIHCSSRVTVGTI
KKFLSLKLKLSSSCELDVLCNGEIMGKDHTLEFIYMTRWRLHSDNRYPMVLEYRPRIDFG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccactcggaggacacccttggtccaaaccagcttggtcaaagactttaaccacttc
attacctgctacctgtgcagaggttacctgatcaaacccaccacggtcactgagtgcctg
cacacattttgtaagagctgcatcatccagcactttgaagacagtaatgactgtcccaaa
tgtggcattcaagtccacgaaacgaaccctctagagatgctaaggttggacaatactctt
gaggaaatcattttcaagcttgtgcctggattacgagaaaaagagggacagcaggagatt
gatttctggaggaagaataagtcaaaagaaatttcacaaggagacggccttgtgtctaag
aagcttgggctcagtgatgaggatggggatgaagatgaccaggattaccacaggagcgac
ccccagatagccatctgcctcgactgtctccacaacaatggctatgctgcagacaacaca
gtgaagtgtttaatgaagaagttcattcattgctctagtcgagtcacggtgggaaccatc
aagaagtttctcagtctaaagttaaagctttctagctcttgtgagctggatgtgctgtgt
aatggggagatcatggggaaggaccacactctggagttcatctacatgacccgctggagg
ctgcacagtgacaacagatatcccatggtcctggagtacaggccaagaatagactttggc
tga
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