Salvelinus namaycush (lake trout): 120046939
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Entry
120046939 CDS
T07522
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120046939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120046939
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120046939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
PDS5
Cnd3
Cnd1
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
120046939
NCBI-ProteinID:
XP_038848418
UniProt:
A0A8U0UD68
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Position
Sna5:12781218..12825804
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AA seq
1291 aa
AA seq
DB search
MEVQHSDESSHDSLEEIEDISDSGSDFEVQLKAMKRRKQTTALLGPRPPKRPRRKAASQA
SPNPSTTSTPPARSPQPPQPSPGRTRQLGSPRRERERRGNQGMSAGDMYEAVRSGKSAMV
AVVDEWLDSYKQDREVGLLELINFVVQCCGCKGVVSREMFDGMQNAEIISTLTKDFNEDS
VNYPLCSPGPQWRKFRAGVCEFVQVLVRSCQNSLLYDEYLFSALLALLTGLSDSQVRAFR
HTSTLIAMKLMTGIVEVAVIVFAQIKTTQRRYDVERSKSAEHRASERLEELQATISELRE
HQEELSSMMNATFRGVFVHRYRDRVAEIRAVCIEEMGVWLRENPGDFLNDGYLKYLGWTL
HDKQGSVRLQCVRALQGLYKEKDLIGRLELFTSRFKERMLCMVLDKDPDVAVEAVQLLLL
LQQRTEEGLSEEECSHVYPLVFASRRGLASAAGAFLYHKLCSAMSSEPQEADMGGRRAAF
FNLLVSFYIQSEFHEHGAYLVDSLWGVAGSELRDWDTMTSLLVQEADQGQGLVDEEEGAL
IELMMCAARQAAEGHPPVGRAQAKKILSMKDKKTQAQDKRRITTHFITILPQLLAKYSAD
VEKVTCLLKAPLHFDLETYSSTGRLEKYLDLLLVQVCGIVEKHTESGVLEACARVACALC
HDKYTFSGRADLVVSQLLDSLTDRFSSHLNELLQGTADEDEVYSAATALTRIAAFSSAKD
LTSWKLFEPCFQLLKSGVESRDIDKELMVPALKCAAFHVLWEKVRVANSTPTKAEVKRLK
KEVRSFCIVCQSCLSVGQPEIRDQAFELLCDMLLLFGVSSVRSQPTLQPLAHPPSDSLRF
DMAAFLLDYVFTEPDDDQLSGEAEGVEEVKMATLQRRRNQLAGYCKLVIYGILDLSTATD
VFKYYSKFYKDYGDIIKETLSKTKVISPVQSAKTVCLSLQQLFSALAPECVDGGQEFGEI
RELAKRLAMSFGIDLHRVRKPLVSLHMDGIRFALREAADVEQPPNLPFLEILSEFSFKLL
RQDRAQLSAFLSAECGSAAPSWPSLRMYQRSLQSGSSKPREEGERSATLSPHSTPAAKRR
RTTPQGSVSSASRGPWLDSSGIHSSVATPGLTSTVQRQPSKHLPVTHNTQASTTGSDKGS
IISEPESDDDFSEGGIHSNLATPGLTSTVQRQPSKHLPVTHNTQASTTGSDKGSIISEPE
SDDDFSEGSLQRKVEPRRRSKLPIAQASPSGHCDLESHLTMLSLIEEDEDDEVEEEEPEI
EDFESDDSDHDTAFTLPSTRHSTSYLEELFQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcaacactctgatgaatcaagccatgacagtcttgaggagatcgaggacatc
tcagactctggcagtgactttgaagtccagctgaaggccatgaagcggagaaaacagacc
actgcactactaggacctcggccacccaagagacctaggcgtaaagctgcatcccaggcc
agcccaaatcccagcaccacctccaccccaccagcccgttcccctcagccaccgcagcct
tccccggggagaactaggcagctcggctcccccaggcgagagagagagaggagggggaac
cagggcatgagcgctggggatatgtatgaggctgtgaggtctggaaagagtgctatggtg
gcggtggtggacgagtggctagacagctacaagcaggatcgggaggtgggcctactggag
ctcatcaacttcgtcgttcagtgctgtggctgcaaaggtgtggtgagcagagagatgttt
gacggcatgcagaacgctgagatcatcagcacactgaccaaagatttcaatgaggattct
gtgaactaccccctgtgctcccctggcccccagtggcgtaagttccgggctggcgtgtgt
gagtttgtgcaggtgctggtgcgctcctgccagaacagccttctgtacgacgagtacctc
ttctctgccctgctggccctgctcaccggcctgtctgactcccaggttagggccttcaga
cacaccagcaccctcatcgcgatgaagctgatgactggtatagtggaggtagcagtgata
gtgtttgcccagattaagaccacccagagacggtacgacgtggagaggagcaagagtgcc
gaacacagagcctcagagaggctggaggaactacaggccaccatcagcgagctgcgggag
caccaggaggagctgtcctccatgatgaatgctacgtttcggggtgtgtttgtgcaccgc
taccgggaccgcgtagctgagatcagggccgtatgtatcgaggagatgggcgtgtggctc
cgagaaaaccctggagacttcctcaacgacggatatctcaagtacctgggctggaccctg
cacgacaagcaaggctcagtgcgtctgcagtgtgtgcgggccctgcagggcctctacaag
gagaaggacttaattggacgcctagagcttttcaccagcaggtttaaggagaggatgctc
tgcatggtgctagacaaggacccagacgtggcggtggaagctgtccagctgctgctgctc
ctccaacaaaggacagaggagggcttgtccgaggaggagtgtagccatgtgtatcctttg
gtgtttgcctcccgcagaggcctggcatctgctgctggtgccttcctctaccacaagctg
tgtagtgcgatgagcagcgagccacaggaggcagacatgggcggccgccgggccgccttc
ttcaacctgctggtctccttttacatccagagtgagttccatgagcacggggcctacctg
gtggacagtctatggggtgtagcaggctctgagctgagggactgggacaccatgacatca
ctgctggtacaggaggctgaccagggacaaggtctggtggatgaggaggagggggcgttg
atagagttgatgatgtgtgctgccagacaggcagctgaaggacacccgcctgtaggaaga
gctcaggccaagaagatcctgagcatgaaggataagaagacccaagcccaggacaagaga
cggatcaccactcattttatcactatcctgccccagctgctggccaagtactcggcggac
gtggagaaagtgacttgccttctgaaggctccgcttcattttgacctggagacctacagc
agcactggtagactggagaagtatctggatctgctgctggtccaggtgtgtggcatcgtg
gagaaacacacggagtctggtgttttggaggcgtgtgctcgcgtggcgtgtgccctctgc
cacgacaagtacaccttctccggccgtgccgacctggtcgtcagccagctactggacagt
ctgaccgaccgcttcagctcccacctcaacgagctgctgcagggcactgctgatgaagat
gaggtgtacagtgctgctactgccctgacgaggatcgcagccttcagcagtgccaaggac
ctgacttcatggaagctgtttgagccctgctttcagctgctgaagagtggagtggagtcc
agagacatcgacaaagagctgatggttcctgctctgaagtgtgcagcgttccacgtgctc
tgggagaaagtcagggtggccaactctacaccaaccaaggcagaggtaaagcgtctgaag
aaggaggtgcgttcgttctgcatcgtctgtcagagctgcctgtctgtgggccagccagag
atcagagaccaggcgtttgagctgctgtgtgacatgctgctgttgtttggggtgagctca
gtgaggtctcagcccaccttgcagcccctggcccaccccccctccgactccctccgcttc
gacatggctgccttcctccttgactatgtcttcactgagcctgacgacgaccaactgtcc
ggtgaggcagagggagttgaggaggtgaagatggctactctccagcggcggcgcaaccag
ctggccggctactgtaaactggttatctatgggatcctggatctcagcactgccactgat
gtcttcaaatactacagcaagttctacaaagactacggtgacatcatcaaggagactctg
agcaaaaccaaggtgatcagtccagtgcagagcgccaagactgtctgcctgagtctgcag
cagttgttctcagcactagctccagagtgcgttgatggaggccaggagtttggggagatc
agagagctagctaaaaggctggccatgagcttcggcatagacctgcaccgcgtccgcaaa
ccattggtgtccctgcatatggatggtatccggtttgcgttacgagaggcagcagacgtg
gagcaaccccccaacctgcccttccttgagatactcagcgagttcagtttcaaactccta
cgtcaggaccgagcccagctgtctgctttcctgagtgctgagtgtggctctgctgccccc
tcctggccatctctgaggatgtaccagcgctctctgcagtctggctcctccaagccccga
gaggagggggagaggagcgccacgctgtccccccacagcacccctgcagccaaacgcagg
aggactaccccccaggggtcagtgtccagcgctagcagagggccatggctggacagcagc
ggtatccatagcagcgtggccaccccaggcctcacctccaccgtgcagagacagccatcc
aagcacctgccagtcacacataatacacaggcctccaccacaggctctgacaagggcagc
atcatctccgaacccgagtctgatgacgacttttcagagggcggcatccacagcaacctg
gccaccccaggcctcacctccaccgtgcagagacagccgtccaagcacctgcccgtcaca
cataatacacaggcctccaccacaggctccgacaagggcagcatcatatccgaacccgag
tctgatgacgacttttcagagggttcactgcagcgcaaggtggaacccaggcgaaggagc
aagctgcctattgcacaagccagcccctctgggcactgtgacctcgaatcacatctcacc
atgctgagtctgattgaggaagatgaggatgatgaagtggaggaagaagagcctgagatt
gaggacttcgagagtgacgattctgaccacgacaccgcctttacactgccgtccacccgt
cactccaccagttacttagaggagttgtttcagtga
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