Salvelinus namaycush (lake trout): 120046950
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Entry
120046950 CDS
T07522
Name
(RefSeq) protocadherin-19-like
KO
K16499
protocadherin delta 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120046950
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Protocadherins
120046950
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
ResB
DUF7350
Motif
Other DBs
NCBI-GeneID:
120046950
NCBI-ProteinID:
XP_038848429
UniProt:
A0A8U0UDQ6
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Position
Sna5:complement(16573542..16674408)
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AA seq
938 aa
AA seq
DB search
MYAKEMDFMLILWIVLLCWTGADSVINLKYSINEEQKAGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTSKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVMDSNDNNPVFD
QPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEATHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRPFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRVAEY
SYGSQKKSSKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLPLGCRRS
ESTFLNVENQNSRNAAPNHGGYQQHPFASGQGPQQPDLIINGMPLPETENYIDSSYVNSR
AHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTVPPNVCQL
PDQGRRKAISDYNGSSALANKEKPTISNHHNLSHCRDH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccaaggaaatggattttatgctaattctttggatagtccttttatgctggact
ggggctgattctgttatcaatttgaaatactcgataaacgaggagcagaaggctgggtat
atcattggaaacgtgacaaaggatgcacaaactcaaggatttgccattgcaccgcgtgcg
ccgtacttgcgggtcatctcgaattcagagccgcgatgggtggaactcagcccggctgga
cttctcctcacacatcagaaaatagaccgggatgtggcttgccgacagacgtcaaagtgc
actgtctctctggaggtgatgtcaaactccatggagatctgtgtgattaaagttgaaatt
gtggatttgaacgataatgcgcccaggttccccacaaaccacattgacattgaaatctca
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactctggg
attttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggttggagattaag
actaggggggacgggtccaagattgccgaactcgtagtgcaaaaatcgttagatagggag
acccagtctcactactcatacgaaatcagtgcagaagacggcggagaccccccaaagatt
ggcgcagtccagctcaatattaaagtaatggattcgaatgataataatcccgtttttgac
cagcctgtgtatacagtgaatgtgatggagaattctcctattaatacacttgtaattgac
ttgaatgcaacggatcctgacgagggaactaatggtgaggttgtatactcgtttaacagt
tacgtcaccgagaaaactagagatgtattcaaaattgaccctagaaccggtattatcact
gtaaatggcccgttggattatgaagcaacccatatttacgagattgatgtccaagccaaa
gatttaggtccaaattctattccggctcattgtaaagtcacggtcaatgtgatggatgca
aatgataacccacctgtcattagtttattgtcggtgaacacagagctgattgaagttagt
gagaacgcgccacgtggatacgttattgcattagtaagggtctcagataaggacgcgggc
gcgaatggcaaggtgcagtgtagactacaaggcaacgtccctttcaggctccaggaatac
gagagcttctcaaccatccttgtcgatggcaggctagacagagaacagagggacacgtac
aatctaactatccaagcagaggacagtggcaccccccctttacgcgccactaagtcgttt
gtagtgaaagtcacagatgaaaatgataaccctccccacttcctaaaaccccattaccaa
gagatggtcctagaaaataacctgcccggctcatgtttgctggcagtgtctgctgtagat
cccgatttgggcatgaatggcaccgtttcatacaccatcgtgcccagtgagattaaacac
atggacgtaaacacatatgtcagtataaatccttcaggacgtatttactcaatgagatca
ttcgaccatgagtacactaggacttttgacttcaaagttttggccagggaccaggggaat
ccgtccttatccagtaacgcgacggtgcgcattgtcgttttggatgtgaatgacaataca
cctgttatgaccactccacccctggtaaatggcaccgcggaagtatccattccaaggaac
gcaggagtgggttacctggtgacccaagtcaaggccgacgactacgacgagggggagaat
ggaaggctgacctataccatttcggagggagacaggcctttctttgaaatagaccaggtg
aatggagaggtgcggtccaccaagatgttcggggagcaggtcaagtcgacctacgagatc
acagtggtggcacgcgaccacgggaaaccgtcgttgtcggcctctgcatacattgttgtc
tacctctcaccggacctgaacgcccaggaatctattggaccagtaaacctgtcattgatt
ttcatcattgccctgggttctattgcagctatcctgtttgtcactatgatttttgtggca
gtcaagtgcaaaagggataacaaggagatccgaacgtacaactgcagggtggcggagtac
tcgtatggcagccagaagaagtcgagcaagaagaagctgagcaagaacgacatccgcctc
gtgccgcgcgacgtggaggagacggacaagatgaacgtggtgagttgctcgtctctcacc
tcctcgctcaactacttcgactaccaccagcagagcctgccgctgggctgcaggcgctcc
gagagcaccttcctcaacgtggagaaccagaactcgcgcaatgccgcgcccaaccacggt
ggctatcagcagcatcccttcgccagcgggcagggtccccagcagcctgacctcatcatc
aacggcatgccgctgccagagacggagaactatatcgactccagctacgtaaacagccga
gcacaccttatcaaaagcacatcgacattcaaggacctggagggcaatagtctgaaggac
agcgggcacgaggagagcgaccagacggacagtgagcacgacgtccagagaggccactac
atagacacggctgtcaacgatgtgctcaatatgaccgtgccccccaacgtctgccagctg
cctgaccaaggtaggagaaaagcgatatctgactacaatgggagttctgcactagccaac
aaggaaaaacccaccatctccaaccaccacaacctgtcccactgcagagaccactag
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