Salvelinus namaycush (lake trout): 120046966
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Entry
120046966 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120046966
04082 Neuroactive ligand signaling
120046966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120046966
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120046966
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
120046966
NCBI-ProteinID:
XP_038848446
UniProt:
A0A8U0UE27
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Position
Sna5:complement(22006055..22058064)
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AA seq
455 aa
AA seq
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MRNRDYIFQCLLICLTLTLLLQTRPVIADPTTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRITEVNTNVYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFDGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYVWTSKAADSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKSIVNDKKKEKASA
MKKNNAYAVAVANYAPSITKDSGLSTIAKGGAADPNMAVGKVGGKTDPKKTFNSVSKIDR
ISRIMFPVLFSSFNLVYWATYLNREPYIKDMVPST
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatagagactacatttttcaatgtctactcatctgccttacactgacgctcctc
ttgcaaacgaggccagtgattgctgatcctacaacagatgccttcaagaacaatatcact
ctcttcacacggatccttgacagacttctagatggctatgataatcgtcttcgacccggc
cttggggatcgtataacagaggtgaataccaatgtctacgtcaccagctttggcccagtt
tcagatacagacatggaatacacaatagacgtgttcttccggcaaagctggaaagatgag
aggttaaaatttgacgggcccatgaacatactgcggctgaacaacttgatggccagtaaa
atatggacgccagacacgttcttccacaacgggaagaagtcagtggctcacaacatgacc
atgcccaataaactactgaggattcaagacgatggcaccctgctttacaccatgaggttg
acggttcacgcagagtgtccgatgcatctggaggacttccccatggacttccactcatgt
cccctgaagtttggcagctatgcctatacaatgtcagaggtgacttatgtctggaccagt
aaggctgccgactctgtggtggtggaaggagagagctcccgtttgaaccagtacgacctg
cttggccaaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatg
acggcacatttccatttgaagcggaagattggatactttgtgatccagacctatctacca
tgcattatgaccgtcatcctctcacaagtatccttctggctgaacagagagtccgtgcca
gctaggactgtgtttggtgtaaccactgtcctgacaatgaccacactgagtataagtgct
cgtaactccctccccaaggtggcctacgccacggccatggactggttcatcgctgtctgc
tacgcctttgtcttctctgccctcatcgagtttgccaccgtcaactacttcacaaagcgc
agctgggcctgggatgggaagagcattgtgaatgacaagaaaaaagagaaggcctccgcc
atgaagaagaacaacgcgtatgccgtggcggtggccaactatgcgcccagcatcaccaag
gactctgggttgtccaccatcgccaagggcggcgccgctgaccccaacatggcggttggc
aaggtgggtggcaaaacggacccaaagaagactttcaacagtgtgagcaaaatcgatagg
atttcaaggattatgttcccagtcctgtttagcagcttcaatttagtctactgggccacg
tacctaaacagagaaccgtatataaaggatatggtgccctcaacctag
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